Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 LINC00265-3P-201ENST00000447588 903 ntBASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 TOB2P1-201ENST00000469761 992 ntBASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 AC019129.2-201ENST00000609837 1235 ntBASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF4Q9BSR8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 AC002558.1-201ENST00000488906 803 ntBASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 IGHV3-52-201ENST00000519770 353 ntBASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 TPSP2-201ENST00000561760 610 ntBASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 MIR3652-201ENST00000579335 131 ntBASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 AC092119.3-201ENST00000612618 583 ntBASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 AC012313.10-201ENST00000623509 926 ntBASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.35■□□□□ 0.21
YIPF4Q9BSR8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF4Q9BSR8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF4Q9BSR8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF4Q9BSR8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF4Q9BSR8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF4Q9BSR8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
YIPF4Q9BSR8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
YIPF4Q9BSR8 AC009053.2-201ENST00000563701 2365 ntBASIC16.34■□□□□ 0.21
YIPF4Q9BSR8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF4Q9BSR8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF4Q9BSR8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
YIPF4Q9BSR8 FAM220CP-201ENST00000395253 831 ntBASIC16.34■□□□□ 0.21
YIPF4Q9BSR8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.34■□□□□ 0.21
YIPF4Q9BSR8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms