Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.82■□□□□ 0.76
ARID3AQ99856 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.82■□□□□ 0.76
ARID3AQ99856 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.82■□□□□ 0.76
ARID3AQ99856 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ARID3AQ99856 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ARID3AQ99856 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
ARID3AQ99856 AC105020.1-201ENST00000435356 2205 ntBASIC19.82■□□□□ 0.76
ARID3AQ99856 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ARID3AQ99856 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.81■□□□□ 0.76
ARID3AQ99856 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.81■□□□□ 0.76
ARID3AQ99856 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ARID3AQ99856 AP000593.1-201ENST00000393668 712 ntBASIC19.81■□□□□ 0.76
ARID3AQ99856 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.81■□□□□ 0.76
ARID3AQ99856 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.81■□□□□ 0.76
ARID3AQ99856 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.81■□□□□ 0.76
ARID3AQ99856 NEK4P2-201ENST00000580004 1012 ntBASIC19.81■□□□□ 0.76
ARID3AQ99856 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.81■□□□□ 0.76
ARID3AQ99856 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.81■□□□□ 0.76
ARID3AQ99856 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.81■□□□□ 0.76
ARID3AQ99856 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.81■□□□□ 0.76
ARID3AQ99856 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.81■□□□□ 0.76
ARID3AQ99856 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.81■□□□□ 0.76
ARID3AQ99856 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARID3AQ99856 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
ARID3AQ99856 PAUPAR-201ENST00000630360 2965 ntBASIC19.8■□□□□ 0.76
ARID3AQ99856 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.8■□□□□ 0.76
ARID3AQ99856 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ARID3AQ99856 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ARID3AQ99856 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARID3AQ99856 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARID3AQ99856 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
ARID3AQ99856 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARID3AQ99856 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.8■□□□□ 0.76
ARID3AQ99856 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARID3AQ99856 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.8■□□□□ 0.76
ARID3AQ99856 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.8■□□□□ 0.76
ARID3AQ99856 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARID3AQ99856 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ARID3AQ99856 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARID3AQ99856 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ARID3AQ99856 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.8■□□□□ 0.76
ARID3AQ99856 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
ARID3AQ99856 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.8■□□□□ 0.76
ARID3AQ99856 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.8■□□□□ 0.76
ARID3AQ99856 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
ARID3AQ99856 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
ARID3AQ99856 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.8■□□□□ 0.76
ARID3AQ99856 AC104390.1-201ENST00000555663 520 ntBASIC19.8■□□□□ 0.76
ARID3AQ99856 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.8■□□□□ 0.76
ARID3AQ99856 GCSHP2-201ENST00000560971 527 ntBASIC19.8■□□□□ 0.76
ARID3AQ99856 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.8■□□□□ 0.76
ARID3AQ99856 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
ARID3AQ99856 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.8■□□□□ 0.76
ARID3AQ99856 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.8■□□□□ 0.76
ARID3AQ99856 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ARID3AQ99856 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ARID3AQ99856 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ARID3AQ99856 AL163051.1-201ENST00000569214 1512 ntBASIC19.8■□□□□ 0.76
ARID3AQ99856 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ARID3AQ99856 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ARID3AQ99856 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARID3AQ99856 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ARID3AQ99856 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARID3AQ99856 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARID3AQ99856 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ARID3AQ99856 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARID3AQ99856 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.79■□□□□ 0.76
ARID3AQ99856 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.79■□□□□ 0.76
ARID3AQ99856 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.79■□□□□ 0.76
ARID3AQ99856 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARID3AQ99856 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARID3AQ99856 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC19.79■□□□□ 0.76
ARID3AQ99856 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
ARID3AQ99856 KRT8P7-201ENST00000533003 1432 ntBASIC19.79■□□□□ 0.76
ARID3AQ99856 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ARID3AQ99856 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ARID3AQ99856 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms