Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SMOQ99835 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
SMOQ99835 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.15■□□□□ 0.5
SMOQ99835 AC004790.2-201ENST00000623588 572 ntBASIC18.15■□□□□ 0.5
SMOQ99835 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SMOQ99835 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.15■□□□□ 0.5
SMOQ99835 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SMOQ99835 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.15■□□□□ 0.5
SMOQ99835 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMOQ99835 AC093525.9-201ENST00000624961 1746 ntBASIC18.15■□□□□ 0.5
SMOQ99835 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
SMOQ99835 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SMOQ99835 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SMOQ99835 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SMOQ99835 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMOQ99835 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMOQ99835 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMOQ99835 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.14■□□□□ 0.49
SMOQ99835 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.14■□□□□ 0.49
SMOQ99835 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.14■□□□□ 0.49
SMOQ99835 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SMOQ99835 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.14■□□□□ 0.49
SMOQ99835 AC141586.5-201ENST00000624546 2050 ntBASIC18.14■□□□□ 0.49
SMOQ99835 PI4KAP1-204ENST00000612579 1703 ntBASIC18.14■□□□□ 0.49
SMOQ99835 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMOQ99835 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.14■□□□□ 0.49
SMOQ99835 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
SMOQ99835 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SMOQ99835 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMOQ99835 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMOQ99835 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMOQ99835 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMOQ99835 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMOQ99835 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.13■□□□□ 0.49
SMOQ99835 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMOQ99835 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.13■□□□□ 0.49
SMOQ99835 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMOQ99835 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SMOQ99835 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMOQ99835 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMOQ99835 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMOQ99835 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMOQ99835 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
SMOQ99835 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.13■□□□□ 0.49
SMOQ99835 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.13■□□□□ 0.49
SMOQ99835 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMOQ99835 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.13■□□□□ 0.49
SMOQ99835 AC140113.2-201ENST00000604370 208 ntBASIC18.13■□□□□ 0.49
SMOQ99835 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SMOQ99835 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.13■□□□□ 0.49
SMOQ99835 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMOQ99835 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.13■□□□□ 0.49
SMOQ99835 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMOQ99835 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMOQ99835 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SMOQ99835 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMOQ99835 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMOQ99835 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SMOQ99835 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.13■□□□□ 0.49
SMOQ99835 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.12■□□□□ 0.49
SMOQ99835 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SMOQ99835 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
SMOQ99835 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.12■□□□□ 0.49
SMOQ99835 PMS2P1-201ENST00000431037 1228 ntBASIC18.12■□□□□ 0.49
SMOQ99835 PAWRP1-201ENST00000451083 565 ntBASIC18.12■□□□□ 0.49
SMOQ99835 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.12■□□□□ 0.49
SMOQ99835 POLD2P1-201ENST00000511220 997 ntBASIC18.12■□□□□ 0.49
SMOQ99835 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.12■□□□□ 0.49
SMOQ99835 KRT18P58-201ENST00000527480 1120 ntBASIC18.12■□□□□ 0.49
SMOQ99835 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.12■□□□□ 0.49
SMOQ99835 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.12■□□□□ 0.49
SMOQ99835 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SMOQ99835 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.12■□□□□ 0.49
SMOQ99835 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMOQ99835 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.12■□□□□ 0.49
SMOQ99835 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.12■□□□□ 0.49
SMOQ99835 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms