Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A3Q99624 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.82■□□□□ 0.28
SLC38A3Q99624 AC108073.2-201ENST00000464002 357 ntBASIC16.82■□□□□ 0.28
SLC38A3Q99624 IGHV3-65-201ENST00000523210 341 ntBASIC16.82■□□□□ 0.28
SLC38A3Q99624 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC38A3Q99624 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SLC38A3Q99624 AL353135.1-201ENST00000606729 504 ntBASIC16.82■□□□□ 0.28
SLC38A3Q99624 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SLC38A3Q99624 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A3Q99624 LINC01451-201ENST00000623792 534 ntBASIC16.82■□□□□ 0.28
SLC38A3Q99624 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC38A3Q99624 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A3Q99624 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLC38A3Q99624 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A3Q99624 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC38A3Q99624 AC046185.3-201ENST00000623228 1824 ntBASIC16.82■□□□□ 0.28
SLC38A3Q99624 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC38A3Q99624 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC38A3Q99624 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 AL805961.1-202ENST00000641562 540 ntBASIC16.81■□□□□ 0.28
SLC38A3Q99624 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC38A3Q99624 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC38A3Q99624 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A3Q99624 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A3Q99624 AL354751.1-201ENST00000412768 1863 ntBASIC16.8■□□□□ 0.28
SLC38A3Q99624 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A3Q99624 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 AC135050.7-201ENST00000624508 2218 ntBASIC16.8■□□□□ 0.28
SLC38A3Q99624 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A3Q99624 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A3Q99624 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 PTCHD3P3-201ENST00000403073 906 ntBASIC16.8■□□□□ 0.28
SLC38A3Q99624 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A3Q99624 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 AC002347.1-201ENST00000569543 541 ntBASIC16.8■□□□□ 0.28
SLC38A3Q99624 MIR3687-2-201ENST00000577708 61 ntBASIC16.8■□□□□ 0.28
SLC38A3Q99624 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 MIR3687-1-201ENST00000614492 61 ntBASIC16.8■□□□□ 0.28
SLC38A3Q99624 AC004790.2-201ENST00000623588 572 ntBASIC16.8■□□□□ 0.28
SLC38A3Q99624 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A3Q99624 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A3Q99624 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A3Q99624 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC38A3Q99624 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC38A3Q99624 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC38A3Q99624 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A3Q99624 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms