Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 LYSMD4-203ENST00000378904 2122 ntBASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 AC096734.2-201ENST00000562054 433 ntBASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 GGTLC5P-201ENST00000617623 998 ntBASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC85AQ96PX6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC85AQ96PX6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 PMS2P2-201ENST00000425039 1128 ntBASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 C20orf181-201ENST00000623918 480 ntBASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 AC079781.4-201ENST00000641908 219 ntBASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC85AQ96PX6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 AL390961.4-201ENST00000623958 2535 ntBASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 PDPK2P-202ENST00000562415 1191 ntBASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC85AQ96PX6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CCDC85AQ96PX6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CCDC85AQ96PX6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC85AQ96PX6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CCDC85AQ96PX6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.45■■□□□ 1.02
CCDC85AQ96PX6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC85AQ96PX6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC85AQ96PX6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC85AQ96PX6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.45■■□□□ 1.02
CCDC85AQ96PX6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC85AQ96PX6 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms