Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 TNRC18P3-201ENST00000441896 2691 ntBASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 NUS1P2-201ENST00000417358 873 ntBASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 AC106795.1-205ENST00000512851 1056 ntBASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDLIM5Q96HC4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 NKILA-202ENST00000614771 2598 ntBASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 FRMD8P1-201ENST00000440433 1524 ntBASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 UPK3BP1-201ENST00000428678 509 ntBASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 AC132008.2-207ENST00000454517 770 ntBASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 AC105020.1-201ENST00000435356 2205 ntBASIC16.92■□□□□ 0.3
PDLIM5Q96HC4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.91■□□□□ 0.3
PDLIM5Q96HC4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms