Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFWD2Q8NHY2 NFIC-211ENST00000641145 8399 ntBASIC17.21■□□□□ 0.34
RFWD2Q8NHY2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFWD2Q8NHY2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFWD2Q8NHY2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFWD2Q8NHY2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RFWD2Q8NHY2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RFWD2Q8NHY2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.21■□□□□ 0.34
RFWD2Q8NHY2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RFWD2Q8NHY2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 SLC25A1P2-201ENST00000430693 912 ntBASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 AP005242.2-201ENST00000580065 1175 ntBASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 AC024243.1-201ENST00000609234 778 ntBASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 CYP2T1P-202ENST00000641596 2535 ntBASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 AC092338.2-201ENST00000568827 1415 ntBASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFWD2Q8NHY2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 AC093525.9-201ENST00000624961 1746 ntBASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 BX276092.7-203ENST00000637198 1536 ntBASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.18■□□□□ 0.34
RFWD2Q8NHY2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms