Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 FAM98A-202ENST00000403368 2818 ntTSL 2 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 PSMA3-AS1-204ENST00000554360 2475 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 HSPH1-209ENST00000630972 3570 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 HECTD3-201ENST00000372168 2530 ntTSL 2 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 SUPT20HL1-201ENST00000436466 2618 ntBASIC10.74□□□□□ -0.69
SVIPQ8NHG7 DDX27-207ENST00000622530 2693 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 ST20-AS1-201ENST00000560255 4223 ntBASIC10.74□□□□□ -0.69
SVIPQ8NHG7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 DDO-201ENST00000368923 1953 ntTSL 2 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 AC078925.2-201ENST00000624013 1973 ntBASIC10.74□□□□□ -0.69
SVIPQ8NHG7 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 MCPH1-207ENST00000522905 2049 ntTSL 2 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 ADGRF5P2-201ENST00000423199 1659 ntBASIC10.74□□□□□ -0.69
SVIPQ8NHG7 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 AC105053.1-201ENST00000366278 1711 ntTSL 2 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 TLR12P-201ENST00000413515 2706 ntBASIC10.74□□□□□ -0.69
SVIPQ8NHG7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 AC079630.1-202ENST00000618127 1840 ntBASIC10.74□□□□□ -0.69
SVIPQ8NHG7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 AL357054.4-201ENST00000606285 2814 ntBASIC10.74□□□□□ -0.69
SVIPQ8NHG7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
SVIPQ8NHG7 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
SVIPQ8NHG7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SVIPQ8NHG7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms