Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 STARP1-201ENST00000397973 869 ntBASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 ZNF444P1-201ENST00000559497 298 ntBASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BBS1Q8NFJ9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 AC008741.2-201ENST00000612792 3115 ntBASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 FAM8A6P-201ENST00000407496 1135 ntBASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 AL596275.1-201ENST00000423464 877 ntBASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 GPR32P1-201ENST00000601788 811 ntBASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
BBS1Q8NFJ9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 CICP6-201ENST00000457191 2729 ntBASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 OR6D1P-203ENST00000641209 4860 ntBASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS1Q8NFJ9 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms