Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
COLGALT1Q8NBJ5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COLGALT1Q8NBJ5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COLGALT1Q8NBJ5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 AL645939.2-201ENST00000427340 991 ntBASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 RHOQP3-201ENST00000437982 621 ntBASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 AC002558.1-201ENST00000488906 803 ntBASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
COLGALT1Q8NBJ5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 AC025580.3-201ENST00000617932 1424 ntBASIC18.66■□□□□ 0.58
COLGALT1Q8NBJ5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 HTR7P1-202ENST00000624664 4411 ntBASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 FAM58CP-201ENST00000435741 640 ntBASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 AC027612.4-201ENST00000605371 583 ntBASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 AC067852.2-201ENST00000590513 2313 ntBASIC18.65■□□□□ 0.58
COLGALT1Q8NBJ5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
COLGALT1Q8NBJ5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.64■□□□□ 0.58
COLGALT1Q8NBJ5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
COLGALT1Q8NBJ5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
COLGALT1Q8NBJ5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
COLGALT1Q8NBJ5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
COLGALT1Q8NBJ5 AC026471.1-201ENST00000564629 3026 ntBASIC18.64■□□□□ 0.57
COLGALT1Q8NBJ5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms