Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.4□□□□□ -0.42
UBE2D3P61077 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.4□□□□□ -0.42
UBE2D3P61077 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
UBE2D3P61077 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.4□□□□□ -0.42
UBE2D3P61077 AC016396.2-201ENST00000562575 1417 ntBASIC12.4□□□□□ -0.42
UBE2D3P61077 AC073508.3-201ENST00000619697 1419 ntBASIC12.4□□□□□ -0.42
UBE2D3P61077 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
UBE2D3P61077 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.4□□□□□ -0.42
UBE2D3P61077 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC12.4□□□□□ -0.42
UBE2D3P61077 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.4□□□□□ -0.42
UBE2D3P61077 MTCL1P1-201ENST00000446207 792 ntBASIC12.4□□□□□ -0.42
UBE2D3P61077 AL359075.1-203ENST00000462729 1002 ntBASIC12.4□□□□□ -0.42
UBE2D3P61077 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.4□□□□□ -0.42
UBE2D3P61077 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
UBE2D3P61077 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.4□□□□□ -0.42
UBE2D3P61077 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.4□□□□□ -0.42
UBE2D3P61077 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.4□□□□□ -0.42
UBE2D3P61077 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.4□□□□□ -0.42
UBE2D3P61077 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.4□□□□□ -0.42
UBE2D3P61077 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 AC008741.2-201ENST00000612792 3115 ntBASIC12.4□□□□□ -0.42
UBE2D3P61077 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.4□□□□□ -0.42
UBE2D3P61077 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
UBE2D3P61077 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
UBE2D3P61077 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 PCDHA14-201ENST00000506751 2298 ntBASIC12.4□□□□□ -0.42
UBE2D3P61077 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBE2D3P61077 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
UBE2D3P61077 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
UBE2D3P61077 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
UBE2D3P61077 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.4□□□□□ -0.43
UBE2D3P61077 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.39□□□□□ -0.43
UBE2D3P61077 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
UBE2D3P61077 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.39□□□□□ -0.43
UBE2D3P61077 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
UBE2D3P61077 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.39□□□□□ -0.43
UBE2D3P61077 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
UBE2D3P61077 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 HBZP1-201ENST00000354915 429 ntBASIC12.39□□□□□ -0.43
UBE2D3P61077 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
UBE2D3P61077 RNF152P1-201ENST00000397754 604 ntBASIC12.39□□□□□ -0.43
UBE2D3P61077 TSPY5P-201ENST00000426936 936 ntBASIC12.39□□□□□ -0.43
UBE2D3P61077 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 AC068472.1-201ENST00000474589 881 ntBASIC12.39□□□□□ -0.43
UBE2D3P61077 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.39□□□□□ -0.43
UBE2D3P61077 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.39□□□□□ -0.43
UBE2D3P61077 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
UBE2D3P61077 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBE2D3P61077 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms