Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN8P56748 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN8P56748 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.51■□□□□ 0.23
CLDN8P56748 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
CLDN8P56748 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN8P56748 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN8P56748 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CLDN8P56748 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CLDN8P56748 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN8P56748 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.51■□□□□ 0.23
CLDN8P56748 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.51■□□□□ 0.23
CLDN8P56748 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN8P56748 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN8P56748 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN8P56748 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CLDN8P56748 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CLDN8P56748 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN8P56748 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLDN8P56748 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CLDN8P56748 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLDN8P56748 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN8P56748 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN8P56748 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLDN8P56748 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLDN8P56748 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLDN8P56748 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.5■□□□□ 0.23
CLDN8P56748 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN8P56748 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN8P56748 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.5■□□□□ 0.23
CLDN8P56748 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN8P56748 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 RN7SL850P-201ENST00000579959 291 ntBASIC16.5■□□□□ 0.23
CLDN8P56748 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN8P56748 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.5■□□□□ 0.23
CLDN8P56748 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 AC009336.1-201ENST00000608941 1553 ntBASIC16.5■□□□□ 0.23
CLDN8P56748 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
CLDN8P56748 AC092068.3-201ENST00000587894 2016 ntBASIC16.5■□□□□ 0.23
CLDN8P56748 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN8P56748 AL135999.2-201ENST00000622438 1686 ntBASIC16.5■□□□□ 0.23
CLDN8P56748 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CLDN8P56748 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN8P56748 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN8P56748 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 RCN1P1-201ENST00000400413 996 ntBASIC16.49■□□□□ 0.23
CLDN8P56748 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.49■□□□□ 0.23
CLDN8P56748 STK19B-204ENST00000512515 211 ntBASIC16.49■□□□□ 0.23
CLDN8P56748 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
CLDN8P56748 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.49■□□□□ 0.23
CLDN8P56748 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.49■□□□□ 0.23
CLDN8P56748 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.49■□□□□ 0.23
CLDN8P56748 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLDN8P56748 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN8P56748 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms