Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PDE6CP51160 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6CP51160 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.77■□□□□ 0.6
PDE6CP51160 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6CP51160 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6CP51160 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.77■□□□□ 0.6
PDE6CP51160 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.77■□□□□ 0.6
PDE6CP51160 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.77■□□□□ 0.6
PDE6CP51160 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.77■□□□□ 0.6
PDE6CP51160 AC104692.2-201ENST00000603054 253 ntBASIC18.77■□□□□ 0.6
PDE6CP51160 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PDE6CP51160 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PDE6CP51160 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.77■□□□□ 0.6
PDE6CP51160 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.77■□□□□ 0.6
PDE6CP51160 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDE6CP51160 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDE6CP51160 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDE6CP51160 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDE6CP51160 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PDE6CP51160 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDE6CP51160 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDE6CP51160 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.77■□□□□ 0.59
PDE6CP51160 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE6CP51160 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.76■□□□□ 0.59
PDE6CP51160 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.76■□□□□ 0.59
PDE6CP51160 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE6CP51160 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.76■□□□□ 0.59
PDE6CP51160 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PDE6CP51160 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 MYCLP1-201ENST00000372451 1075 ntBASIC18.76■□□□□ 0.59
PDE6CP51160 FAM220CP-201ENST00000395253 831 ntBASIC18.76■□□□□ 0.59
PDE6CP51160 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE6CP51160 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.76■□□□□ 0.59
PDE6CP51160 IGHV3-52-201ENST00000519770 353 ntBASIC18.76■□□□□ 0.59
PDE6CP51160 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDE6CP51160 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.76■□□□□ 0.59
PDE6CP51160 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.76■□□□□ 0.59
PDE6CP51160 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.76■□□□□ 0.59
PDE6CP51160 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PDE6CP51160 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.76■□□□□ 0.59
PDE6CP51160 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDE6CP51160 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 AC124067.4-201ENST00000519691 2379 ntBASIC18.76■□□□□ 0.59
PDE6CP51160 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDE6CP51160 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 AC016396.2-201ENST00000562575 1417 ntBASIC18.75■□□□□ 0.59
PDE6CP51160 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.75■□□□□ 0.59
PDE6CP51160 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.75■□□□□ 0.59
PDE6CP51160 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.75■□□□□ 0.59
PDE6CP51160 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.75■□□□□ 0.59
PDE6CP51160 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
PDE6CP51160 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.75■□□□□ 0.59
PDE6CP51160 AC079781.3-201ENST00000449110 356 ntBASIC18.75■□□□□ 0.59
PDE6CP51160 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 AC122714.2-201ENST00000502787 707 ntBASIC18.75■□□□□ 0.59
PDE6CP51160 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.75■□□□□ 0.59
PDE6CP51160 AC106795.1-205ENST00000512851 1056 ntBASIC18.75■□□□□ 0.59
PDE6CP51160 AP002469.2-201ENST00000531724 424 ntBASIC18.75■□□□□ 0.59
PDE6CP51160 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.75■□□□□ 0.59
PDE6CP51160 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.75■□□□□ 0.59
PDE6CP51160 AC019129.2-201ENST00000609837 1235 ntBASIC18.75■□□□□ 0.59
PDE6CP51160 TP73-AS1-210ENST00000637775 1455 ntBASIC18.75■□□□□ 0.59
PDE6CP51160 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PDE6CP51160 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.75■□□□□ 0.59
PDE6CP51160 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDE6CP51160 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms