Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1DP48730 PP12613-201ENST00000424958 2230 ntBASIC17.35■□□□□ 0.37
CSNK1DP48730 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1DP48730 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.35■□□□□ 0.37
CSNK1DP48730 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.35■□□□□ 0.37
CSNK1DP48730 AC009947.1-201ENST00000444350 727 ntBASIC17.35■□□□□ 0.37
CSNK1DP48730 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.35■□□□□ 0.37
CSNK1DP48730 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CSNK1DP48730 AC106730.1-201ENST00000566722 1090 ntBASIC17.35■□□□□ 0.37
CSNK1DP48730 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.35■□□□□ 0.37
CSNK1DP48730 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1DP48730 Z83851.2-201ENST00000609564 659 ntBASIC17.35■□□□□ 0.37
CSNK1DP48730 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.35■□□□□ 0.37
CSNK1DP48730 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1DP48730 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1DP48730 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
CSNK1DP48730 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.35■□□□□ 0.37
CSNK1DP48730 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1DP48730 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1DP48730 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1DP48730 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.35■□□□□ 0.37
CSNK1DP48730 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1DP48730 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1DP48730 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.35■□□□□ 0.37
CSNK1DP48730 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CSNK1DP48730 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSNK1DP48730 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1DP48730 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CSNK1DP48730 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1DP48730 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CSNK1DP48730 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1DP48730 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CSNK1DP48730 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1DP48730 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1DP48730 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.34■□□□□ 0.37
CSNK1DP48730 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.34■□□□□ 0.37
CSNK1DP48730 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1DP48730 PRSS29P-201ENST00000440800 595 ntBASIC17.34■□□□□ 0.37
CSNK1DP48730 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CSNK1DP48730 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1DP48730 AC034105.1-201ENST00000563488 319 ntBASIC17.34■□□□□ 0.37
CSNK1DP48730 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.34■□□□□ 0.37
CSNK1DP48730 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.34■□□□□ 0.37
CSNK1DP48730 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
CSNK1DP48730 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1DP48730 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1DP48730 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1DP48730 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1DP48730 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.34■□□□□ 0.37
CSNK1DP48730 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSNK1DP48730 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.34■□□□□ 0.37
CSNK1DP48730 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CSNK1DP48730 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CSNK1DP48730 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1DP48730 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1DP48730 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1DP48730 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1DP48730 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.33■□□□□ 0.37
CSNK1DP48730 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1DP48730 PCDHB18P-201ENST00000524813 2368 ntBASIC17.33■□□□□ 0.37
CSNK1DP48730 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.33■□□□□ 0.37
CSNK1DP48730 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1DP48730 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1DP48730 LINC02012-201ENST00000608206 1725 ntBASIC17.33■□□□□ 0.37
CSNK1DP48730 PI4KAP1-204ENST00000612579 1703 ntBASIC17.33■□□□□ 0.37
CSNK1DP48730 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CSNK1DP48730 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1DP48730 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.33■□□□□ 0.37
CSNK1DP48730 AC026471.1-201ENST00000564629 3026 ntBASIC17.33■□□□□ 0.37
CSNK1DP48730 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CSNK1DP48730 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1DP48730 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CSNK1DP48730 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CSNK1DP48730 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.33■□□□□ 0.36
CSNK1DP48730 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1DP48730 AC108751.1-201ENST00000490852 363 ntBASIC17.33■□□□□ 0.36
CSNK1DP48730 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1DP48730 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.33■□□□□ 0.36
CSNK1DP48730 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CSNK1DP48730 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.33■□□□□ 0.36
CSNK1DP48730 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1DP48730 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1DP48730 AC141586.5-201ENST00000624546 2050 ntBASIC17.33■□□□□ 0.36
CSNK1DP48730 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.33■□□□□ 0.36
CSNK1DP48730 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.33■□□□□ 0.36
CSNK1DP48730 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1DP48730 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CSNK1DP48730 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1DP48730 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CSNK1DP48730 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CSNK1DP48730 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.33■□□□□ 0.36
CSNK1DP48730 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSNK1DP48730 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.32■□□□□ 0.36
CSNK1DP48730 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1DP48730 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CSNK1DP48730 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CSNK1DP48730 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSNK1DP48730 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.32■□□□□ 0.36
CSNK1DP48730 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CSNK1DP48730 ZNF259P1-201ENST00000407656 1365 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms