Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.76■□□□□ 0.75
CLCN1P35523 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLCN1P35523 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 AC116353.5-201ENST00000638148 1699 ntBASIC19.76■□□□□ 0.75
CLCN1P35523 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLCN1P35523 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.76■□□□□ 0.75
CLCN1P35523 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.76■□□□□ 0.75
CLCN1P35523 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.76■□□□□ 0.75
CLCN1P35523 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLCN1P35523 RNF216P1-203ENST00000404404 2427 ntBASIC19.76■□□□□ 0.75
CLCN1P35523 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLCN1P35523 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.76■□□□□ 0.75
CLCN1P35523 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.76■□□□□ 0.75
CLCN1P35523 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLCN1P35523 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.76■□□□□ 0.75
CLCN1P35523 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CLCN1P35523 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CLCN1P35523 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC19.75■□□□□ 0.75
CLCN1P35523 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.75■□□□□ 0.75
CLCN1P35523 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CLCN1P35523 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.75■□□□□ 0.75
CLCN1P35523 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.75■□□□□ 0.75
CLCN1P35523 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CLCN1P35523 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.75■□□□□ 0.75
CLCN1P35523 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 ECEL1P2-202ENST00000465689 757 ntBASIC19.75■□□□□ 0.75
CLCN1P35523 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.75■□□□□ 0.75
CLCN1P35523 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.75■□□□□ 0.75
CLCN1P35523 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 FAM87A-204ENST00000613235 858 ntBASIC19.75■□□□□ 0.75
CLCN1P35523 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.75■□□□□ 0.75
CLCN1P35523 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.75■□□□□ 0.75
CLCN1P35523 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.75■□□□□ 0.75
CLCN1P35523 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CLCN1P35523 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CLCN1P35523 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLCN1P35523 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCN1P35523 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCN1P35523 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLCN1P35523 HLA-J-201ENST00000462773 1622 ntBASIC19.74■□□□□ 0.75
CLCN1P35523 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CLCN1P35523 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCN1P35523 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CLCN1P35523 KRT18P23-201ENST00000435622 1283 ntBASIC19.74■□□□□ 0.75
CLCN1P35523 AC128688.1-201ENST00000487626 519 ntBASIC19.74■□□□□ 0.75
CLCN1P35523 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.74■□□□□ 0.75
CLCN1P35523 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.74■□□□□ 0.75
CLCN1P35523 PKD1P1-201ENST00000458669 6805 ntBASIC19.74■□□□□ 0.75
CLCN1P35523 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLCN1P35523 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCN1P35523 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCN1P35523 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms