Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.67■□□□□ 0.26
CCKBRP32239 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.67■□□□□ 0.26
CCKBRP32239 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CCKBRP32239 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCKBRP32239 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.67■□□□□ 0.26
CCKBRP32239 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCKBRP32239 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCKBRP32239 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.66■□□□□ 0.26
CCKBRP32239 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.66■□□□□ 0.26
CCKBRP32239 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.66■□□□□ 0.26
CCKBRP32239 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CCKBRP32239 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.66■□□□□ 0.26
CCKBRP32239 AC010507.1-201ENST00000633895 436 ntBASIC16.66■□□□□ 0.26
CCKBRP32239 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CCKBRP32239 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CCKBRP32239 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CCKBRP32239 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 AC100803.2-201ENST00000562459 1963 ntBASIC16.66■□□□□ 0.26
CCKBRP32239 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCKBRP32239 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.65■□□□□ 0.26
CCKBRP32239 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.65■□□□□ 0.26
CCKBRP32239 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCKBRP32239 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCKBRP32239 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCKBRP32239 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.65■□□□□ 0.26
CCKBRP32239 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.65■□□□□ 0.26
CCKBRP32239 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.65■□□□□ 0.26
CCKBRP32239 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCKBRP32239 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CCKBRP32239 LINC00982-205ENST00000420957 435 ntBASIC16.65■□□□□ 0.26
CCKBRP32239 CNN2P11-201ENST00000429351 262 ntBASIC16.65■□□□□ 0.26
CCKBRP32239 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.65■□□□□ 0.26
CCKBRP32239 AL078644.1-201ENST00000609881 752 ntBASIC16.65■□□□□ 0.26
CCKBRP32239 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.65■□□□□ 0.26
CCKBRP32239 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.65■□□□□ 0.26
CCKBRP32239 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.65■□□□□ 0.26
CCKBRP32239 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.65■□□□□ 0.26
CCKBRP32239 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.65■□□□□ 0.26
CCKBRP32239 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCKBRP32239 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
CCKBRP32239 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCKBRP32239 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 LETM1P2-201ENST00000597330 2178 ntBASIC16.64■□□□□ 0.25
CCKBRP32239 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.64■□□□□ 0.25
CCKBRP32239 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCKBRP32239 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCKBRP32239 RHOQP3-201ENST00000437982 621 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms