Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA10P31260 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA10P31260 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.01■□□□□ 0.95
HOXA10P31260 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA10P31260 TERF1P3-201ENST00000505638 1227 ntBASIC21.01■□□□□ 0.95
HOXA10P31260 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HOXA10P31260 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
HOXA10P31260 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.01■□□□□ 0.95
HOXA10P31260 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA10P31260 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
HOXA10P31260 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.01■□□□□ 0.95
HOXA10P31260 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA10P31260 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA10P31260 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA10P31260 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA10P31260 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA10P31260 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA10P31260 AL353732.1-201ENST00000569618 1459 ntBASIC21.01■□□□□ 0.95
HOXA10P31260 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
HOXA10P31260 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXA10P31260 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXA10P31260 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21■□□□□ 0.95
HOXA10P31260 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXA10P31260 UXT-AS1-201ENST00000590504 1525 ntBASIC21■□□□□ 0.95
HOXA10P31260 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXA10P31260 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXA10P31260 MIR346-201ENST00000362234 95 ntBASIC21■□□□□ 0.95
HOXA10P31260 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21■□□□□ 0.95
HOXA10P31260 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21■□□□□ 0.95
HOXA10P31260 TREML5P-201ENST00000421694 576 ntBASIC21■□□□□ 0.95
HOXA10P31260 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXA10P31260 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21■□□□□ 0.95
HOXA10P31260 CCDC74BP1-201ENST00000508880 1123 ntBASIC21■□□□□ 0.95
HOXA10P31260 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21■□□□□ 0.95
HOXA10P31260 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21■□□□□ 0.95
HOXA10P31260 AL158211.3-201ENST00000607385 239 ntBASIC21■□□□□ 0.95
HOXA10P31260 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HOXA10P31260 WASH6P-202ENST00000359512 1437 ntBASIC21■□□□□ 0.95
HOXA10P31260 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HOXA10P31260 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
HOXA10P31260 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21■□□□□ 0.95
HOXA10P31260 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXA10P31260 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21■□□□□ 0.95
HOXA10P31260 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXA10P31260 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXA10P31260 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXA10P31260 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
HOXA10P31260 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.99■□□□□ 0.95
HOXA10P31260 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
HOXA10P31260 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA10P31260 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
HOXA10P31260 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA10P31260 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA10P31260 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.99■□□□□ 0.95
HOXA10P31260 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXA10P31260 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.99■□□□□ 0.95
HOXA10P31260 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA10P31260 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXA10P31260 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA10P31260 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXA10P31260 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXA10P31260 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA10P31260 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXA10P31260 AC063926.2-201ENST00000623766 1308 ntBASIC20.99■□□□□ 0.95
HOXA10P31260 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.99■□□□□ 0.95
HOXA10P31260 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.99■□□□□ 0.95
HOXA10P31260 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA10P31260 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA10P31260 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXA10P31260 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HOXA10P31260 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HOXA10P31260 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA10P31260 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA10P31260 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA10P31260 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.98■□□□□ 0.95
HOXA10P31260 HCG4-201ENST00000418983 998 ntBASIC20.98■□□□□ 0.95
HOXA10P31260 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.98■□□□□ 0.95
HOXA10P31260 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.98■□□□□ 0.95
HOXA10P31260 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXA10P31260 SLC25A39P2-201ENST00000537614 270 ntBASIC20.98■□□□□ 0.95
HOXA10P31260 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXA10P31260 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXA10P31260 AL035252.4-201ENST00000624174 288 ntBASIC20.98■□□□□ 0.95
HOXA10P31260 AC008267.7-201ENST00000624570 1194 ntBASIC20.98■□□□□ 0.95
HOXA10P31260 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.98■□□□□ 0.95
HOXA10P31260 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HOXA10P31260 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA10P31260 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA10P31260 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA10P31260 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA10P31260 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXA10P31260 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HOXA10P31260 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA10P31260 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA10P31260 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA10P31260 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA10P31260 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA10P31260 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
HOXA10P31260 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXA10P31260 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms