Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 GAPVD1-212ENST00000467750 3163 ntTSL 56.82□□□□□ -1.325e-28■■■□□ 15.7
RPS3P23396 GAPVD1-208ENST00000431329 2512 ntTSL 26.81□□□□□ -1.325e-28■■■□□ 15.7
RPS3P23396 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.335e-28■■■□□ 15.7
RPS3P23396 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.365e-28■■■□□ 15.7
RPS3P23396 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.53□□□□□ -1.525e-28■■■□□ 15.7
RPS3P23396 SERPINA7-203ENST00000487487 395 ntTSL 36.29□□□□□ -1.41e-7■■■□□ 15.7
RPS3P23396 ARF1-209ENST00000478424 1059 ntTSL 223.83■■□□□ 1.413e-12■■■□□ 15.7
RPS3P23396 ARF1-208ENST00000478336 930 ntTSL 223.44■■□□□ 1.343e-12■■■□□ 15.7
RPS3P23396 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.173e-12■■■□□ 15.7
RPS3P23396 ARF1-206ENST00000473949 578 ntTSL 519.85■□□□□ 0.773e-12■■■□□ 15.7
RPS3P23396 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.43e-12■■■□□ 15.7
RPS3P23396 ARF1-207ENST00000477451 789 ntTSL 517.03■□□□□ 0.323e-12■■■□□ 15.7
RPS3P23396 ARF1-203ENST00000470558 820 ntTSL 215.3■□□□□ 0.043e-12■■■□□ 15.7
RPS3P23396 ARF1-212ENST00000497165 675 ntTSL 315.3■□□□□ 0.043e-12■■■□□ 15.7
RPS3P23396 ARF1-202ENST00000469235 678 ntTSL 315.13■□□□□ 0.013e-12■■■□□ 15.7
RPS3P23396 ARF1-210ENST00000482962 597 ntTSL 314.67□□□□□ -0.063e-12■■■□□ 15.7
RPS3P23396 ARF1-204ENST00000470670 712 ntTSL 314.09□□□□□ -0.153e-12■■■□□ 15.7
RPS3P23396 ARF1-201ENST00000272102 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.723e-12■■■□□ 15.7
RPS3P23396 AHSA1-206ENST00000555457 641 ntTSL 315.6■□□□□ 0.098e-9■■■□□ 15.7
RPS3P23396 AHSA1-209ENST00000555729 621 ntTSL 315.6■□□□□ 0.098e-9■■■□□ 15.7
RPS3P23396 AHSA1-207ENST00000555473 561 ntTSL 212.24□□□□□ -0.458e-9■■■□□ 15.7
RPS3P23396 AHSA1-210ENST00000556369 849 ntTSL 511.58□□□□□ -0.568e-9■■■□□ 15.7
RPS3P23396 LRPAP1-201ENST00000296325 1078 ntTSL 1 (best)16.49■□□□□ 0.234e-8■■■□□ 15.7
RPS3P23396 RPL35A-203ENST00000439255 564 ntTSL 56.23□□□□□ -1.413e-18■■■□□ 15.7
RPS3P23396 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.15e-11■■■□□ 15.7
RPS3P23396 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15□□□□□ -0.015e-11■■■□□ 15.7
RPS3P23396 HM13-204ENST00000398174 3792 ntTSL 1 (best) BASIC10.66□□□□□ -0.75e-11■■■□□ 15.7
RPS3P23396 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.344e-7■■■□□ 15.6
RPS3P23396 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.84■■□□□ 1.254e-7■■■□□ 15.6
RPS3P23396 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.37■■□□□ 1.174e-7■■■□□ 15.6
RPS3P23396 SLC35B2-203ENST00000495706 1859 ntTSL 322.37■■□□□ 1.174e-7■■■□□ 15.6
RPS3P23396 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19■□□□□ 0.634e-7■■■□□ 15.6
RPS3P23396 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.2□□□□□ -0.144e-7■■■□□ 15.6
RPS3P23396 CYP27A1-204ENST00000466602 1210 ntTSL 222.38■■□□□ 1.174e-7■■■□□ 15.6
RPS3P23396 WARS-210ENST00000553769 560 ntTSL 412.38□□□□□ -0.437e-12■■■□□ 15.6
RPS3P23396 WARS-208ENST00000553545 591 ntTSL 410.65□□□□□ -0.77e-12■■■□□ 15.6
RPS3P23396 WARS-219ENST00000554820 538 ntTSL 46.7□□□□□ -1.347e-12■■■□□ 15.6
RPS3P23396 WARS-237ENST00000557094 582 ntTSL 26.44□□□□□ -1.387e-12■■■□□ 15.6
RPS3P23396 FDPS-218ENST00000492887 554 ntTSL 27.95□□□□□ -1.146e-8■■■□□ 15.6
RPS3P23396 PDIA3-202ENST00000434494 2107 ntTSL 214.44□□□□□ -0.11e-10■■■□□ 15.6
RPS3P23396 PDIA3-201ENST00000300289 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.71e-10■■■□□ 15.6
RPS3P23396 PDIA3-204ENST00000455250 725 ntTSL 58.08□□□□□ -1.121e-10■■■□□ 15.6
RPS3P23396 SYVN1-212ENST00000530451 656 ntTSL 518.42■□□□□ 0.542e-8■■■□□ 15.6
RPS3P23396 DHRS3-203ENST00000482265 1036 ntTSL 314.93□□□□□ -0.026e-9■■■□□ 15.6
RPS3P23396 WARS-214ENST00000554331 831 ntTSL 216.54■□□□□ 0.242e-9■■■□□ 15.6
RPS3P23396 WARS-222ENST00000555063 573 ntTSL 214.61□□□□□ -0.072e-9■■■□□ 15.6
RPS3P23396 WARS-228ENST00000556338 547 ntTSL 410.14□□□□□ -0.792e-9■■■□□ 15.6
RPS3P23396 WARS-211ENST00000553808 1060 ntTSL 28.74□□□□□ -1.012e-9■■■□□ 15.6
RPS3P23396 ANXA2-229ENST00000560165 718 ntTSL 316.37■□□□□ 0.219e-8■■■□□ 15.6
RPS3P23396 ANXA2-224ENST00000559725 561 ntTSL 412.53□□□□□ -0.49e-8■■■□□ 15.6
RPS3P23396 ANXA2-222ENST00000559559 1076 ntTSL 28.54□□□□□ -1.049e-8■■■□□ 15.6
RPS3P23396 ANXA2-213ENST00000558558 513 ntTSL 38.5□□□□□ -1.059e-8■■■□□ 15.6
RPS3P23396 ANXA2-230ENST00000560367 777 ntTSL 35.94□□□□□ -1.469e-8■■■□□ 15.6
RPS3P23396 ANXA2-237ENST00000561022 834 ntTSL 55.94□□□□□ -1.469e-8■■■□□ 15.6
RPS3P23396 ANXA2-210ENST00000558132 580 ntTSL 35.31□□□□□ -1.569e-8■■■□□ 15.6
RPS3P23396 ANXA2-217ENST00000559113 564 ntTSL 55.19□□□□□ -1.589e-8■■■□□ 15.6
RPS3P23396 ANXA2-215ENST00000558986 560 ntTSL 34.62□□□□□ -1.679e-8■■■□□ 15.6
RPS3P23396 ANXA2-207ENST00000557906 812 ntTSL 54.58□□□□□ -1.689e-8■■■□□ 15.6
RPS3P23396 ANXA2-231ENST00000560389 594 ntTSL 54.45□□□□□ -1.79e-8■■■□□ 15.6
RPS3P23396 ANXA2-212ENST00000558503 828 ntTSL 53.99□□□□□ -1.779e-8■■■□□ 15.6
RPS3P23396 ANXA2-216ENST00000558998 543 ntTSL 53.69□□□□□ -1.829e-8■■■□□ 15.6
RPS3P23396 ANXA2-219ENST00000559350 669 ntTSL 53.43□□□□□ -1.869e-8■■■□□ 15.6
RPS3P23396 SF3B3-206ENST00000565990 967 ntTSL 212.44□□□□□ -0.423e-7■■■□□ 15.6
RPS3P23396 STC2-204ENST00000520593 566 ntTSL 412.44□□□□□ -0.423e-11■■■□□ 15.6
RPS3P23396 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.182e-7■■■□□ 15.6
RPS3P23396 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.252e-7■■■□□ 15.6
RPS3P23396 XRCC6-206ENST00000428575 2148 ntTSL 2 BASIC10.76□□□□□ -0.692e-7■■■□□ 15.6
RPS3P23396 XRCC6-204ENST00000405506 1958 ntTSL 5 BASIC10.24□□□□□ -0.772e-7■■■□□ 15.6
RPS3P23396 XRCC6-205ENST00000405878 2200 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.832e-7■■■□□ 15.6
RPS3P23396 XRCC6-203ENST00000402580 2006 ntTSL 2 BASIC9.82□□□□□ -0.842e-7■■■□□ 15.6
RPS3P23396 NDUFV1-210ENST00000527923 594 ntTSL 218.2■□□□□ 0.52e-7■■■□□ 15.6
RPS3P23396 FUCA2-203ENST00000451668 737 ntTSL 29.04□□□□□ -0.969e-7■■■□□ 15.6
RPS3P23396 HNRNPL-204ENST00000595443 2122 ntTSL 211.32□□□□□ -0.62e-8■■■□□ 15.6
RPS3P23396 SLC16A3-212ENST00000581642 557 ntTSL 417.62■□□□□ 0.411e-26■■■□□ 15.6
RPS3P23396 ACTR3-204ENST00000446821 818 ntTSL 316.12■□□□□ 0.174e-7■■■□□ 15.6
RPS3P23396 ARL6IP6-205ENST00000495469 1308 ntTSL 220.26■□□□□ 0.839e-11■■■□□ 15.6
RPS3P23396 BCKDHA-206ENST00000542943 994 ntTSL 518.21■□□□□ 0.514e-6■■■□□ 15.6
RPS3P23396 BCKDHA-204ENST00000538423 816 ntTSL 517.82■□□□□ 0.444e-6■■■□□ 15.6
RPS3P23396 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.39e-11■■■□□ 15.6
RPS3P23396 RBBP7-210ENST00000481586 503 ntTSL 28.02□□□□□ -1.131e-6■■■□□ 15.6
RPS3P23396 SERPINA5-202ENST00000553511 574 ntTSL 213.1□□□□□ -0.312e-14■■■□□ 15.6
RPS3P23396 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.411e-11■■■□□ 15.6
RPS3P23396 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.631e-11■■■□□ 15.6
RPS3P23396 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.03■□□□□ 0.162e-6■■■□□ 15.6
RPS3P23396 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.6□□□□□ -0.232e-6■■■□□ 15.6
RPS3P23396 CARS-202ENST00000380525 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.462e-6■■■□□ 15.6
RPS3P23396 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC12.13□□□□□ -0.472e-6■■■□□ 15.6
RPS3P23396 CARS-212ENST00000526890 5732 ntTSL 210.74□□□□□ -0.692e-6■■■□□ 15.6
RPS3P23396 CARS-215ENST00000531387 2805 ntTSL 210.41□□□□□ -0.742e-6■■■□□ 15.6
RPS3P23396 CFI-207ENST00000618244 1345 ntTSL 5 BASIC7.95□□□□□ -1.148e-9■■■□□ 15.6
RPS3P23396 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.288e-9■■■□□ 15.6
RPS3P23396 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.328e-9■■■□□ 15.6
RPS3P23396 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.628e-9■■■□□ 15.6
RPS3P23396 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.49e-7■■■□□ 15.6
RPS3P23396 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.73■□□□□ 0.279e-7■■■□□ 15.6
RPS3P23396 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.27■□□□□ 0.24e-6■■■□□ 15.6
RPS3P23396 MOB1B-205ENST00000511449 627 ntTSL 316.27■□□□□ 0.24e-6■■■□□ 15.6
RPS3P23396 MOB1B-203ENST00000502869 760 ntTSL 315.21■□□□□ 0.034e-6■■■□□ 15.6
RPS3P23396 MOB1B-204ENST00000509041 2056 ntTSL 211.65□□□□□ -0.544e-6■■■□□ 15.6
RPS3P23396 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.474e-6■■■□□ 15.6
Retrieved 100 of 24,271 protein–RNA pairs in 305 ms