Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.08■□□□□ 0.64
MMP3P08254 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP3P08254 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.08■□□□□ 0.64
MMP3P08254 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP3P08254 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP3P08254 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP3P08254 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.07■□□□□ 0.64
MMP3P08254 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MMP3P08254 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MMP3P08254 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP3P08254 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MMP3P08254 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP3P08254 AC135050.7-201ENST00000624508 2218 ntBASIC19.07■□□□□ 0.64
MMP3P08254 SLC25A6P5-201ENST00000435663 894 ntBASIC19.07■□□□□ 0.64
MMP3P08254 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MMP3P08254 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MMP3P08254 AC109322.1-201ENST00000524499 1264 ntBASIC19.07■□□□□ 0.64
MMP3P08254 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.07■□□□□ 0.64
MMP3P08254 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.07■□□□□ 0.64
MMP3P08254 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.07■□□□□ 0.64
MMP3P08254 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP3P08254 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
MMP3P08254 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP3P08254 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.07■□□□□ 0.64
MMP3P08254 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MMP3P08254 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MMP3P08254 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.07■□□□□ 0.64
MMP3P08254 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP3P08254 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MMP3P08254 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.07■□□□□ 0.64
MMP3P08254 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
MMP3P08254 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MMP3P08254 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
MMP3P08254 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.06■□□□□ 0.64
MMP3P08254 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MMP3P08254 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MMP3P08254 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MMP3P08254 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
MMP3P08254 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
MMP3P08254 AC133963.1-201ENST00000504166 1679 ntBASIC19.06■□□□□ 0.64
MMP3P08254 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
MMP3P08254 MIR770-201ENST00000390219 98 ntBASIC19.06■□□□□ 0.64
MMP3P08254 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.06■□□□□ 0.64
MMP3P08254 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.06■□□□□ 0.64
MMP3P08254 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.06■□□□□ 0.64
MMP3P08254 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.06■□□□□ 0.64
MMP3P08254 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.06■□□□□ 0.64
MMP3P08254 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.06■□□□□ 0.64
MMP3P08254 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
MMP3P08254 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.06■□□□□ 0.64
MMP3P08254 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
MMP3P08254 AC026120.1-201ENST00000611536 926 ntBASIC19.06■□□□□ 0.64
MMP3P08254 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.06■□□□□ 0.64
MMP3P08254 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MMP3P08254 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
MMP3P08254 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MMP3P08254 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
MMP3P08254 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MMP3P08254 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
MMP3P08254 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MMP3P08254 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MMP3P08254 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MMP3P08254 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MMP3P08254 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MMP3P08254 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.05■□□□□ 0.64
MMP3P08254 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MMP3P08254 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MMP3P08254 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.05■□□□□ 0.64
MMP3P08254 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
MMP3P08254 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
MMP3P08254 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MMP3P08254 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MMP3P08254 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MMP3P08254 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
MMP3P08254 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MMP3P08254 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
MMP3P08254 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.05■□□□□ 0.64
MMP3P08254 AL671277.1-201ENST00000429656 993 ntBASIC19.05■□□□□ 0.64
MMP3P08254 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.05■□□□□ 0.64
MMP3P08254 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.05■□□□□ 0.64
MMP3P08254 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.05■□□□□ 0.64
MMP3P08254 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.05■□□□□ 0.64
MMP3P08254 KRT8P48-201ENST00000515599 1220 ntBASIC19.05■□□□□ 0.64
MMP3P08254 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.05■□□□□ 0.64
MMP3P08254 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
MMP3P08254 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.05■□□□□ 0.64
MMP3P08254 AC093520.2-201ENST00000561830 333 ntBASIC19.05■□□□□ 0.64
MMP3P08254 MIR4515-201ENST00000584082 81 ntBASIC19.05■□□□□ 0.64
MMP3P08254 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.05■□□□□ 0.64
MMP3P08254 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.05■□□□□ 0.64
MMP3P08254 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
MMP3P08254 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.05■□□□□ 0.64
MMP3P08254 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MMP3P08254 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MMP3P08254 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.05■□□□□ 0.64
MMP3P08254 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MMP3P08254 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MMP3P08254 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MMP3P08254 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
MMP3P08254 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms