Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.51■□□□□ 0.71
TPM3P06753 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TPM3P06753 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
TPM3P06753 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.5■□□□□ 0.71
TPM3P06753 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TPM3P06753 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.5■□□□□ 0.71
TPM3P06753 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TPM3P06753 AC007950.2-201ENST00000615045 2347 ntBASIC19.5■□□□□ 0.71
TPM3P06753 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.5■□□□□ 0.71
TPM3P06753 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.5■□□□□ 0.71
TPM3P06753 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.5■□□□□ 0.71
TPM3P06753 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.5■□□□□ 0.71
TPM3P06753 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TPM3P06753 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TPM3P06753 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TPM3P06753 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM3P06753 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM3P06753 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.49■□□□□ 0.71
TPM3P06753 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM3P06753 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM3P06753 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.49■□□□□ 0.71
TPM3P06753 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM3P06753 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM3P06753 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TPM3P06753 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM3P06753 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM3P06753 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.49■□□□□ 0.71
TPM3P06753 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM3P06753 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM3P06753 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM3P06753 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.49■□□□□ 0.71
TPM3P06753 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TPM3P06753 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM3P06753 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM3P06753 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM3P06753 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM3P06753 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM3P06753 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM3P06753 BX276092.7-203ENST00000637198 1536 ntBASIC19.49■□□□□ 0.71
TPM3P06753 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.49■□□□□ 0.71
TPM3P06753 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM3P06753 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.49■□□□□ 0.71
TPM3P06753 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.49■□□□□ 0.71
TPM3P06753 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TPM3P06753 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 LINC02012-201ENST00000608206 1725 ntBASIC19.48■□□□□ 0.71
TPM3P06753 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
TPM3P06753 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
TPM3P06753 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
TPM3P06753 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.48■□□□□ 0.71
TPM3P06753 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TPM3P06753 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TPM3P06753 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.48■□□□□ 0.71
TPM3P06753 AC128688.1-201ENST00000487626 519 ntBASIC19.48■□□□□ 0.71
TPM3P06753 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.48■□□□□ 0.71
TPM3P06753 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.48■□□□□ 0.71
TPM3P06753 NEK4P2-201ENST00000580004 1012 ntBASIC19.48■□□□□ 0.71
TPM3P06753 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.48■□□□□ 0.71
TPM3P06753 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
TPM3P06753 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TPM3P06753 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.48■□□□□ 0.71
TPM3P06753 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TPM3P06753 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.48■□□□□ 0.71
TPM3P06753 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TPM3P06753 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms