Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.1■□□□□ 0.65
CD4P01730 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CD4P01730 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD4P01730 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CD4P01730 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CD4P01730 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD4P01730 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
CD4P01730 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.09■□□□□ 0.65
CD4P01730 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CD4P01730 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.09■□□□□ 0.65
CD4P01730 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD4P01730 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CD4P01730 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD4P01730 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD4P01730 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD4P01730 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CD4P01730 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.09■□□□□ 0.65
CD4P01730 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.09■□□□□ 0.65
CD4P01730 FAM86GP-201ENST00000448322 971 ntBASIC19.09■□□□□ 0.65
CD4P01730 AL513480.1-201ENST00000451731 511 ntBASIC19.09■□□□□ 0.65
CD4P01730 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.09■□□□□ 0.65
CD4P01730 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.09■□□□□ 0.65
CD4P01730 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.09■□□□□ 0.65
CD4P01730 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.09■□□□□ 0.65
CD4P01730 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD4P01730 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
CD4P01730 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD4P01730 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CD4P01730 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD4P01730 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD4P01730 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.09■□□□□ 0.65
CD4P01730 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.09■□□□□ 0.65
CD4P01730 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.09■□□□□ 0.65
CD4P01730 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
CD4P01730 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CD4P01730 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
CD4P01730 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CD4P01730 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD4P01730 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CD4P01730 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CD4P01730 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.08■□□□□ 0.65
CD4P01730 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD4P01730 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CD4P01730 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CD4P01730 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD4P01730 AL354751.1-201ENST00000412768 1863 ntBASIC19.08■□□□□ 0.65
CD4P01730 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD4P01730 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CD4P01730 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CD4P01730 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CD4P01730 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CD4P01730 AL627223.1-201ENST00000416693 442 ntBASIC19.08■□□□□ 0.64
CD4P01730 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.08■□□□□ 0.64
CD4P01730 AC244107.1-201ENST00000442033 332 ntBASIC19.08■□□□□ 0.64
CD4P01730 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.08■□□□□ 0.64
CD4P01730 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.08■□□□□ 0.64
CD4P01730 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.08■□□□□ 0.64
CD4P01730 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.08■□□□□ 0.64
CD4P01730 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD4P01730 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD4P01730 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD4P01730 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CD4P01730 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.08■□□□□ 0.64
CD4P01730 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CD4P01730 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CD4P01730 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD4P01730 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CD4P01730 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CD4P01730 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CD4P01730 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CD4P01730 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CD4P01730 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CD4P01730 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.07■□□□□ 0.64
CD4P01730 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.07■□□□□ 0.64
CD4P01730 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CD4P01730 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CD4P01730 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
CD4P01730 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.07■□□□□ 0.64
CD4P01730 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.07■□□□□ 0.64
CD4P01730 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.07■□□□□ 0.64
CD4P01730 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.07■□□□□ 0.64
CD4P01730 AJ011932.1-201ENST00000621707 465 ntBASIC19.07■□□□□ 0.64
CD4P01730 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.07■□□□□ 0.64
CD4P01730 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.07■□□□□ 0.64
CD4P01730 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CD4P01730 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms