Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NDUFA3O95167 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.9□□□□□ -0.18
NDUFA3O95167 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NDUFA3O95167 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
NDUFA3O95167 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NDUFA3O95167 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NDUFA3O95167 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
NDUFA3O95167 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
NDUFA3O95167 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NDUFA3O95167 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NDUFA3O95167 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.89□□□□□ -0.19
NDUFA3O95167 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.89□□□□□ -0.19
NDUFA3O95167 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFA3O95167 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 RBM17P3-201ENST00000417687 1192 ntBASIC13.89□□□□□ -0.19
NDUFA3O95167 AL020989.1-201ENST00000422979 469 ntBASIC13.89□□□□□ -0.19
NDUFA3O95167 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.89□□□□□ -0.19
NDUFA3O95167 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.89□□□□□ -0.19
NDUFA3O95167 AC106795.1-205ENST00000512851 1056 ntBASIC13.89□□□□□ -0.19
NDUFA3O95167 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
NDUFA3O95167 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.89□□□□□ -0.19
NDUFA3O95167 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.89□□□□□ -0.19
NDUFA3O95167 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.89□□□□□ -0.19
NDUFA3O95167 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NDUFA3O95167 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 AP005117.1-201ENST00000584346 1413 ntBASIC13.89□□□□□ -0.19
NDUFA3O95167 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NDUFA3O95167 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NDUFA3O95167 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NDUFA3O95167 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.88□□□□□ -0.19
NDUFA3O95167 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NDUFA3O95167 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA3O95167 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.88□□□□□ -0.19
NDUFA3O95167 AC132008.2-207ENST00000454517 770 ntBASIC13.88□□□□□ -0.19
NDUFA3O95167 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.88□□□□□ -0.19
NDUFA3O95167 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.88□□□□□ -0.19
NDUFA3O95167 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.88□□□□□ -0.19
NDUFA3O95167 AC091304.2-201ENST00000564639 760 ntBASIC13.88□□□□□ -0.19
NDUFA3O95167 CLEC4GP1-201ENST00000596555 870 ntBASIC13.88□□□□□ -0.19
NDUFA3O95167 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.88□□□□□ -0.19
NDUFA3O95167 AP001269.4-201ENST00000609611 512 ntBASIC13.88□□□□□ -0.19
NDUFA3O95167 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA3O95167 AC079776.2-201ENST00000641154 1609 ntBASIC13.88□□□□□ -0.19
NDUFA3O95167 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.88□□□□□ -0.19
NDUFA3O95167 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 PKD1P5-201ENST00000532415 10291 ntBASIC13.88□□□□□ -0.19
NDUFA3O95167 AC106820.2-201ENST00000563775 3264 ntBASIC13.88□□□□□ -0.19
NDUFA3O95167 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA3O95167 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.88□□□□□ -0.19
NDUFA3O95167 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA3O95167 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA3O95167 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NDUFA3O95167 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
NDUFA3O95167 AC108860.2-201ENST00000562760 2183 ntBASIC13.88□□□□□ -0.19
NDUFA3O95167 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NDUFA3O95167 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.87□□□□□ -0.19
NDUFA3O95167 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
NDUFA3O95167 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA3O95167 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA3O95167 AC012313.1-201ENST00000593393 3059 ntBASIC13.87□□□□□ -0.19
NDUFA3O95167 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NDUFA3O95167 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA3O95167 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA3O95167 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NDUFA3O95167 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA3O95167 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA3O95167 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA3O95167 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms