Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLSTN1O94985 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.26■□□□□ 0.67
CLSTN1O94985 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.26■□□□□ 0.67
CLSTN1O94985 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.26■□□□□ 0.67
CLSTN1O94985 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.26■□□□□ 0.67
CLSTN1O94985 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLSTN1O94985 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CLSTN1O94985 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 AC074051.2-201ENST00000565115 352 ntBASIC19.26■□□□□ 0.67
CLSTN1O94985 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.26■□□□□ 0.67
CLSTN1O94985 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLSTN1O94985 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.26■□□□□ 0.67
CLSTN1O94985 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLSTN1O94985 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CLSTN1O94985 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLSTN1O94985 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.25■□□□□ 0.67
CLSTN1O94985 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.25■□□□□ 0.67
CLSTN1O94985 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CLSTN1O94985 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.25■□□□□ 0.67
CLSTN1O94985 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.25■□□□□ 0.67
CLSTN1O94985 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.25■□□□□ 0.67
CLSTN1O94985 DUTP2-201ENST00000519164 463 ntBASIC19.25■□□□□ 0.67
CLSTN1O94985 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.25■□□□□ 0.67
CLSTN1O94985 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.25■□□□□ 0.67
CLSTN1O94985 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.25■□□□□ 0.67
CLSTN1O94985 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.25■□□□□ 0.67
CLSTN1O94985 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.25■□□□□ 0.67
CLSTN1O94985 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.25■□□□□ 0.67
CLSTN1O94985 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CLSTN1O94985 AC009949.1-201ENST00000623048 1830 ntBASIC19.25■□□□□ 0.67
CLSTN1O94985 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.25■□□□□ 0.67
CLSTN1O94985 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLSTN1O94985 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLSTN1O94985 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
CLSTN1O94985 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLSTN1O94985 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.24■□□□□ 0.67
CLSTN1O94985 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CLSTN1O94985 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 AC104819.1-201ENST00000504587 486 ntBASIC19.24■□□□□ 0.67
CLSTN1O94985 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.24■□□□□ 0.67
CLSTN1O94985 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLSTN1O94985 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
CLSTN1O94985 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CLSTN1O94985 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms