Protein–RNA interactions for Protein: O94907

DKK1, Dickkopf-related protein 1, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK1O94907 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DKK1O94907 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DKK1O94907 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DKK1O94907 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
DKK1O94907 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DKK1O94907 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.42■□□□□ 0.22
DKK1O94907 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DKK1O94907 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DKK1O94907 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
DKK1O94907 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.42■□□□□ 0.22
DKK1O94907 AC007274.1-201ENST00000439805 662 ntBASIC16.42■□□□□ 0.22
DKK1O94907 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.42■□□□□ 0.22
DKK1O94907 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.42■□□□□ 0.22
DKK1O94907 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DKK1O94907 AC097493.3-201ENST00000509725 367 ntBASIC16.42■□□□□ 0.22
DKK1O94907 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.42■□□□□ 0.22
DKK1O94907 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
DKK1O94907 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DKK1O94907 AL390754.1-201ENST00000619088 582 ntBASIC16.42■□□□□ 0.22
DKK1O94907 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.42■□□□□ 0.22
DKK1O94907 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DKK1O94907 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DKK1O94907 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DKK1O94907 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
DKK1O94907 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.42■□□□□ 0.22
DKK1O94907 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
DKK1O94907 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
DKK1O94907 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
DKK1O94907 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.42■□□□□ 0.22
DKK1O94907 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.42■□□□□ 0.22
DKK1O94907 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DKK1O94907 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.41■□□□□ 0.22
DKK1O94907 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.41■□□□□ 0.22
DKK1O94907 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.41■□□□□ 0.22
DKK1O94907 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
DKK1O94907 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.41■□□□□ 0.22
DKK1O94907 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DKK1O94907 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 OR8S1-201ENST00000310194 1080 ntBASIC16.41■□□□□ 0.22
DKK1O94907 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.41■□□□□ 0.22
DKK1O94907 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.41■□□□□ 0.22
DKK1O94907 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.41■□□□□ 0.22
DKK1O94907 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.41■□□□□ 0.22
DKK1O94907 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DKK1O94907 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.41■□□□□ 0.22
DKK1O94907 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.41■□□□□ 0.22
DKK1O94907 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.41■□□□□ 0.22
DKK1O94907 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.41■□□□□ 0.22
DKK1O94907 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
DKK1O94907 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DKK1O94907 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DKK1O94907 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DKK1O94907 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.4■□□□□ 0.22
DKK1O94907 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DKK1O94907 AL354751.1-201ENST00000412768 1863 ntBASIC16.4■□□□□ 0.22
DKK1O94907 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DKK1O94907 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DKK1O94907 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DKK1O94907 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.4■□□□□ 0.22
DKK1O94907 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DKK1O94907 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DKK1O94907 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
DKK1O94907 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DKK1O94907 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.4■□□□□ 0.22
DKK1O94907 AC092580.3-201ENST00000430932 139 ntBASIC16.4■□□□□ 0.22
DKK1O94907 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DKK1O94907 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.4■□□□□ 0.22
DKK1O94907 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.4■□□□□ 0.22
DKK1O94907 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.4■□□□□ 0.22
DKK1O94907 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DKK1O94907 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.4■□□□□ 0.22
DKK1O94907 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.4■□□□□ 0.22
DKK1O94907 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DKK1O94907 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.4■□□□□ 0.22
DKK1O94907 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.4■□□□□ 0.22
DKK1O94907 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DKK1O94907 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DKK1O94907 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.4■□□□□ 0.22
DKK1O94907 ABALON-201ENST00000629058 1903 ntBASIC16.4■□□□□ 0.22
DKK1O94907 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DKK1O94907 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
DKK1O94907 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms