Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
USP1O94782 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.6■□□□□ 0.41
USP1O94782 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
USP1O94782 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP1O94782 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
USP1O94782 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
USP1O94782 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
USP1O94782 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
USP1O94782 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
USP1O94782 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.59■□□□□ 0.41
USP1O94782 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.59■□□□□ 0.41
USP1O94782 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.59■□□□□ 0.41
USP1O94782 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.59■□□□□ 0.41
USP1O94782 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.59■□□□□ 0.41
USP1O94782 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.59■□□□□ 0.41
USP1O94782 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.59■□□□□ 0.41
USP1O94782 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.59■□□□□ 0.41
USP1O94782 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.59■□□□□ 0.41
USP1O94782 AC011840.4-201ENST00000578471 627 ntBASIC17.59■□□□□ 0.41
USP1O94782 AC091076.1-201ENST00000610741 619 ntBASIC17.59■□□□□ 0.41
USP1O94782 IGHV3-41-201ENST00000613121 348 ntBASIC17.59■□□□□ 0.41
USP1O94782 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.59■□□□□ 0.41
USP1O94782 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.59■□□□□ 0.41
USP1O94782 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
USP1O94782 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
USP1O94782 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.59■□□□□ 0.41
USP1O94782 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
USP1O94782 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
USP1O94782 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP1O94782 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
USP1O94782 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
USP1O94782 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP1O94782 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP1O94782 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP1O94782 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP1O94782 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP1O94782 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
USP1O94782 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
USP1O94782 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.58■□□□□ 0.41
USP1O94782 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP1O94782 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP1O94782 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.58■□□□□ 0.4
USP1O94782 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP1O94782 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP1O94782 AC246785.2-201ENST00000432512 513 ntBASIC17.58■□□□□ 0.4
USP1O94782 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.58■□□□□ 0.4
USP1O94782 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.58■□□□□ 0.4
USP1O94782 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.58■□□□□ 0.4
USP1O94782 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.58■□□□□ 0.4
USP1O94782 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP1O94782 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.58■□□□□ 0.4
USP1O94782 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.58■□□□□ 0.4
USP1O94782 AL121956.5-201ENST00000625261 221 ntBASIC17.58■□□□□ 0.4
USP1O94782 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP1O94782 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP1O94782 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP1O94782 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP1O94782 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
USP1O94782 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
USP1O94782 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP1O94782 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.58■□□□□ 0.4
USP1O94782 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
USP1O94782 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP1O94782 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP1O94782 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
USP1O94782 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
USP1O94782 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
USP1O94782 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
USP1O94782 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP1O94782 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms