Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.18■□□□□ 0.82
CTNND1O60716 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.18■□□□□ 0.82
CTNND1O60716 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CTNND1O60716 AC092364.2-202ENST00000597012 1073 ntBASIC20.18■□□□□ 0.82
CTNND1O60716 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTNND1O60716 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTNND1O60716 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNND1O60716 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNND1O60716 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNND1O60716 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CTNND1O60716 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNND1O60716 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.18■□□□□ 0.82
CTNND1O60716 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNND1O60716 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTNND1O60716 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.17■□□□□ 0.82
CTNND1O60716 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.17■□□□□ 0.82
CTNND1O60716 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.17■□□□□ 0.82
CTNND1O60716 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.17■□□□□ 0.82
CTNND1O60716 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CTNND1O60716 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.17■□□□□ 0.82
CTNND1O60716 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.17■□□□□ 0.82
CTNND1O60716 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.17■□□□□ 0.82
CTNND1O60716 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CTNND1O60716 FAM8A3P-201ENST00000427218 844 ntBASIC20.17■□□□□ 0.82
CTNND1O60716 ADH5P3-201ENST00000433842 1137 ntBASIC20.17■□□□□ 0.82
CTNND1O60716 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.17■□□□□ 0.82
CTNND1O60716 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
CTNND1O60716 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.17■□□□□ 0.82
CTNND1O60716 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.17■□□□□ 0.82
CTNND1O60716 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.17■□□□□ 0.82
CTNND1O60716 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.17■□□□□ 0.82
CTNND1O60716 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.17■□□□□ 0.82
CTNND1O60716 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
CTNND1O60716 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.17■□□□□ 0.82
CTNND1O60716 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CTNND1O60716 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CTNND1O60716 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.17■□□□□ 0.82
CTNND1O60716 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTNND1O60716 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
CTNND1O60716 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.16■□□□□ 0.82
CTNND1O60716 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.16■□□□□ 0.82
CTNND1O60716 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CTNND1O60716 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CTNND1O60716 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.16■□□□□ 0.82
CTNND1O60716 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.16■□□□□ 0.82
CTNND1O60716 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.16■□□□□ 0.82
CTNND1O60716 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.16■□□□□ 0.82
CTNND1O60716 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.16■□□□□ 0.82
CTNND1O60716 AC025678.2-201ENST00000562061 970 ntBASIC20.16■□□□□ 0.82
CTNND1O60716 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.16■□□□□ 0.82
CTNND1O60716 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CTNND1O60716 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.16■□□□□ 0.82
CTNND1O60716 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.16■□□□□ 0.82
CTNND1O60716 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.16■□□□□ 0.82
CTNND1O60716 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
CTNND1O60716 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTNND1O60716 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CTNND1O60716 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CTNND1O60716 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CTNND1O60716 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CTNND1O60716 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.15■□□□□ 0.82
CTNND1O60716 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.15■□□□□ 0.82
CTNND1O60716 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.15■□□□□ 0.82
CTNND1O60716 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CTNND1O60716 AC023141.5-201ENST00000458585 616 ntBASIC20.15■□□□□ 0.82
CTNND1O60716 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.15■□□□□ 0.82
CTNND1O60716 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.15■□□□□ 0.82
CTNND1O60716 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.15■□□□□ 0.82
CTNND1O60716 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms