Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.12■□□□□ 0.01
XRCC2O43543 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
XRCC2O43543 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.12■□□□□ 0.01
XRCC2O43543 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
XRCC2O43543 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
XRCC2O43543 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
XRCC2O43543 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
XRCC2O43543 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XRCC2O43543 AP002383.4-201ENST00000442518 975 ntBASIC15.12■□□□□ 0.01
XRCC2O43543 LINC00265-3P-201ENST00000447588 903 ntBASIC15.12■□□□□ 0.01
XRCC2O43543 KRT17P6-201ENST00000453795 1220 ntBASIC15.12■□□□□ 0.01
XRCC2O43543 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.12■□□□□ 0.01
XRCC2O43543 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.12■□□□□ 0.01
XRCC2O43543 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
XRCC2O43543 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
XRCC2O43543 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XRCC2O43543 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XRCC2O43543 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
XRCC2O43543 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XRCC2O43543 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
XRCC2O43543 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.11■□□□□ 0.01
XRCC2O43543 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.11■□□□□ 0.01
XRCC2O43543 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 AC046185.3-201ENST00000623228 1824 ntBASIC15.11■□□□□ 0.01
XRCC2O43543 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.11■□□□□ 0.01
XRCC2O43543 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
XRCC2O43543 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
XRCC2O43543 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.11■□□□□ 0.01
XRCC2O43543 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.11■□□□□ 0.01
XRCC2O43543 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.11■□□□□ 0.01
XRCC2O43543 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.11■□□□□ 0.01
XRCC2O43543 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.11■□□□□ 0.01
XRCC2O43543 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
XRCC2O43543 AC091607.1-201ENST00000490318 1060 ntBASIC15.11■□□□□ 0.01
XRCC2O43543 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.11■□□□□ 0.01
XRCC2O43543 KRT18P35-201ENST00000510488 1269 ntBASIC15.11■□□□□ 0.01
XRCC2O43543 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.11■□□□□ 0.01
XRCC2O43543 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.11■□□□□ 0.01
XRCC2O43543 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
XRCC2O43543 AP005901.3-202ENST00000581653 237 ntBASIC15.11■□□□□ 0.01
XRCC2O43543 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
XRCC2O43543 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.11■□□□□ 0.01
XRCC2O43543 AL358472.4-201ENST00000633140 710 ntBASIC15.11■□□□□ 0.01
XRCC2O43543 AL353593.2-201ENST00000602529 1483 ntBASIC15.11■□□□□ 0.01
XRCC2O43543 TP73-AS1-210ENST00000637775 1455 ntBASIC15.11■□□□□ 0.01
XRCC2O43543 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
XRCC2O43543 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.11■□□□□ 0.01
XRCC2O43543 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.11■□□□□ 0.01
XRCC2O43543 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.11■□□□□ 0.01
XRCC2O43543 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XRCC2O43543 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
XRCC2O43543 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
XRCC2O43543 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.1■□□□□ 0.01
XRCC2O43543 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
XRCC2O43543 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XRCC2O43543 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
XRCC2O43543 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
XRCC2O43543 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XRCC2O43543 AC116353.5-201ENST00000638148 1699 ntBASIC15.1■□□□□ 0.01
XRCC2O43543 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
XRCC2O43543 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.1■□□□□ 0.01
XRCC2O43543 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.1■□□□□ 0.01
XRCC2O43543 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
XRCC2O43543 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XRCC2O43543 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.1■□□□□ 0.01
XRCC2O43543 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XRCC2O43543 AC003669.1-201ENST00000334569 611 ntBASIC15.1■□□□□ 0.01
XRCC2O43543 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
XRCC2O43543 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.1■□□□□ 0.01
XRCC2O43543 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.1■□□□□ 0.01
XRCC2O43543 AC104819.1-201ENST00000504587 486 ntBASIC15.1■□□□□ 0.01
XRCC2O43543 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms