Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
ABCC4O15439 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ABCC4O15439 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC22■■□□□ 1.11
ABCC4O15439 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
ABCC4O15439 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22■■□□□ 1.11
ABCC4O15439 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22■■□□□ 1.11
ABCC4O15439 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
ABCC4O15439 AC023274.1-201ENST00000418278 595 ntBASIC22■■□□□ 1.11
ABCC4O15439 PRYP5-201ENST00000451909 266 ntBASIC22■■□□□ 1.11
ABCC4O15439 AC004967.1-201ENST00000453589 447 ntBASIC22■■□□□ 1.11
ABCC4O15439 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
ABCC4O15439 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22■■□□□ 1.11
ABCC4O15439 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC22■■□□□ 1.11
ABCC4O15439 AC064836.3-201ENST00000607928 673 ntBASIC22■■□□□ 1.11
ABCC4O15439 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC22■■□□□ 1.11
ABCC4O15439 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC22■■□□□ 1.11
ABCC4O15439 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
ABCC4O15439 AC020763.4-201ENST00000623414 4170 ntBASIC22■■□□□ 1.11
ABCC4O15439 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.99■■□□□ 1.11
ABCC4O15439 AP001094.4-201ENST00000579008 2176 ntBASIC21.99■■□□□ 1.11
ABCC4O15439 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.99■■□□□ 1.11
ABCC4O15439 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.99■■□□□ 1.11
ABCC4O15439 AC093525.9-201ENST00000624961 1746 ntBASIC21.99■■□□□ 1.11
ABCC4O15439 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.99■■□□□ 1.11
ABCC4O15439 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ABCC4O15439 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
ABCC4O15439 ACTG1P4-201ENST00000425123 1122 ntBASIC21.99■■□□□ 1.11
ABCC4O15439 RPS8P6-201ENST00000426177 609 ntBASIC21.99■■□□□ 1.11
ABCC4O15439 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
ABCC4O15439 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.99■■□□□ 1.11
ABCC4O15439 AC002347.1-201ENST00000569543 541 ntBASIC21.99■■□□□ 1.11
ABCC4O15439 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ABCC4O15439 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.99■■□□□ 1.11
ABCC4O15439 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.99■■□□□ 1.11
ABCC4O15439 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.99■■□□□ 1.11
ABCC4O15439 MIR1199-201ENST00000621445 119 ntBASIC21.99■■□□□ 1.11
ABCC4O15439 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ABCC4O15439 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.99■■□□□ 1.11
ABCC4O15439 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
ABCC4O15439 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.98■■□□□ 1.11
ABCC4O15439 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.98■■□□□ 1.11
ABCC4O15439 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
ABCC4O15439 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.98■■□□□ 1.11
ABCC4O15439 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ABCC4O15439 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ABCC4O15439 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
ABCC4O15439 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ABCC4O15439 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.98■■□□□ 1.11
ABCC4O15439 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ABCC4O15439 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ABCC4O15439 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
ABCC4O15439 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ABCC4O15439 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.98■■□□□ 1.11
ABCC4O15439 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ABCC4O15439 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
ABCC4O15439 URGCP-206ENST00000446958 365 ntTSL 2 BASIC21.98■■□□□ 1.11
ABCC4O15439 AC108751.1-201ENST00000490852 363 ntBASIC21.98■■□□□ 1.11
ABCC4O15439 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.98■■□□□ 1.11
ABCC4O15439 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ABCC4O15439 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.98■■□□□ 1.11
ABCC4O15439 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.98■■□□□ 1.11
ABCC4O15439 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
ABCC4O15439 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC21.98■■□□□ 1.11
ABCC4O15439 MIR3687-2-201ENST00000577708 61 ntBASIC21.98■■□□□ 1.11
ABCC4O15439 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.98■■□□□ 1.11
ABCC4O15439 MIR3687-1-201ENST00000614492 61 ntBASIC21.98■■□□□ 1.11
ABCC4O15439 AC005593.1-201ENST00000624894 515 ntBASIC21.98■■□□□ 1.11
ABCC4O15439 AC134684.3-201ENST00000641758 218 ntBASIC21.98■■□□□ 1.11
ABCC4O15439 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
ABCC4O15439 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ABCC4O15439 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
ABCC4O15439 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.97■■□□□ 1.11
ABCC4O15439 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
ABCC4O15439 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 PMS2P2-201ENST00000425039 1128 ntBASIC21.97■■□□□ 1.11
ABCC4O15439 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 AC136632.2-201ENST00000512891 861 ntBASIC21.97■■□□□ 1.11
ABCC4O15439 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.97■■□□□ 1.11
ABCC4O15439 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.97■■□□□ 1.11
ABCC4O15439 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.97■■□□□ 1.11
ABCC4O15439 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.97■■□□□ 1.11
ABCC4O15439 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.97■■□□□ 1.11
ABCC4O15439 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCC4O15439 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms