Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PIK3C2AO00443 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PIK3C2AO00443 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
PIK3C2AO00443 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PIK3C2AO00443 HCG4-201ENST00000418983 998 ntBASIC23■■□□□ 1.27
PIK3C2AO00443 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC23■■□□□ 1.27
PIK3C2AO00443 PPP6R2P1-201ENST00000450880 1275 ntBASIC23■■□□□ 1.27
PIK3C2AO00443 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PIK3C2AO00443 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC23■■□□□ 1.27
PIK3C2AO00443 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC23■■□□□ 1.27
PIK3C2AO00443 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC23■■□□□ 1.27
PIK3C2AO00443 TUBB3P1-201ENST00000405796 1332 ntBASIC22.99■■□□□ 1.27
PIK3C2AO00443 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PIK3C2AO00443 AC008677.1-201ENST00000519230 1561 ntBASIC22.99■■□□□ 1.27
PIK3C2AO00443 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
PIK3C2AO00443 FO538757.1-201ENST00000623083 1397 ntBASIC22.99■■□□□ 1.27
PIK3C2AO00443 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC22.99■■□□□ 1.27
PIK3C2AO00443 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PIK3C2AO00443 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC22.99■■□□□ 1.27
PIK3C2AO00443 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC22.99■■□□□ 1.27
PIK3C2AO00443 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC22.99■■□□□ 1.27
PIK3C2AO00443 AC087641.1-201ENST00000557561 1021 ntBASIC22.99■■□□□ 1.27
PIK3C2AO00443 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC22.99■■□□□ 1.27
PIK3C2AO00443 SSH2-211ENST00000590153 570 ntTSL 4 BASIC22.99■■□□□ 1.27
PIK3C2AO00443 MIR6080-201ENST00000617359 66 ntBASIC22.99■■□□□ 1.27
PIK3C2AO00443 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PIK3C2AO00443 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
PIK3C2AO00443 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PIK3C2AO00443 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PIK3C2AO00443 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PIK3C2AO00443 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PIK3C2AO00443 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
PIK3C2AO00443 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.98■■□□□ 1.27
PIK3C2AO00443 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PIK3C2AO00443 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC22.98■■□□□ 1.27
PIK3C2AO00443 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC22.98■■□□□ 1.27
PIK3C2AO00443 AC002472.2-201ENST00000442739 958 ntBASIC22.98■■□□□ 1.27
PIK3C2AO00443 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC22.98■■□□□ 1.27
PIK3C2AO00443 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC22.98■■□□□ 1.27
PIK3C2AO00443 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PIK3C2AO00443 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PIK3C2AO00443 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PIK3C2AO00443 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.98■■□□□ 1.27
PIK3C2AO00443 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PIK3C2AO00443 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC22.98■■□□□ 1.27
PIK3C2AO00443 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.98■■□□□ 1.27
PIK3C2AO00443 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
PIK3C2AO00443 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PIK3C2AO00443 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
PIK3C2AO00443 NARF-206ENST00000457415 1668 ntTSL 5 BASIC22.97■■□□□ 1.27
PIK3C2AO00443 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PIK3C2AO00443 AC055876.3-201ENST00000431496 288 ntBASIC22.97■■□□□ 1.27
PIK3C2AO00443 PNKD-204ENST00000436005 978 ntTSL 5 BASIC22.97■■□□□ 1.27
PIK3C2AO00443 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC22.97■■□□□ 1.27
PIK3C2AO00443 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
PIK3C2AO00443 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PIK3C2AO00443 AC239800.4-201ENST00000603712 296 ntBASIC22.97■■□□□ 1.27
PIK3C2AO00443 AL158211.3-201ENST00000607385 239 ntBASIC22.97■■□□□ 1.27
PIK3C2AO00443 AC138649.4-201ENST00000612222 287 ntBASIC22.97■■□□□ 1.27
PIK3C2AO00443 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC22.97■■□□□ 1.27
PIK3C2AO00443 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
PIK3C2AO00443 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
PIK3C2AO00443 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PIK3C2AO00443 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PIK3C2AO00443 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
PIK3C2AO00443 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC22.97■■□□□ 1.27
PIK3C2AO00443 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC22.97■■□□□ 1.27
PIK3C2AO00443 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC22.97■■□□□ 1.27
PIK3C2AO00443 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC22.97■■□□□ 1.27
PIK3C2AO00443 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
PIK3C2AO00443 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PIK3C2AO00443 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PIK3C2AO00443 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PIK3C2AO00443 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.96■■□□□ 1.27
PIK3C2AO00443 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
PIK3C2AO00443 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
PIK3C2AO00443 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.96■■□□□ 1.27
PIK3C2AO00443 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
PIK3C2AO00443 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PIK3C2AO00443 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC22.96■■□□□ 1.27
PIK3C2AO00443 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC22.96■■□□□ 1.27
PIK3C2AO00443 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PIK3C2AO00443 AP000842.3-202ENST00000569238 1080 ntBASIC22.96■■□□□ 1.27
PIK3C2AO00443 AC091167.2-201ENST00000579581 588 ntBASIC22.96■■□□□ 1.27
PIK3C2AO00443 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC22.96■■□□□ 1.27
PIK3C2AO00443 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PIK3C2AO00443 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC22.96■■□□□ 1.27
PIK3C2AO00443 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC22.96■■□□□ 1.27
PIK3C2AO00443 AC016027.1-202ENST00000607927 1699 ntBASIC22.96■■□□□ 1.27
PIK3C2AO00443 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PIK3C2AO00443 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC22.96■■□□□ 1.27
PIK3C2AO00443 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
PIK3C2AO00443 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
PIK3C2AO00443 HARS-204ENST00000438307 1789 ntTSL 2 BASIC22.95■■□□□ 1.27
PIK3C2AO00443 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PIK3C2AO00443 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
PIK3C2AO00443 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PIK3C2AO00443 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PIK3C2AO00443 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC22.95■■□□□ 1.26
PIK3C2AO00443 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms