Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 MTHFR-217ENST00000641820 1569 ntBASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 HLA-L-209ENST00000420110 1011 ntBASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 FAM197Y4-202ENST00000622692 608 ntBASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.26■□□□□ 0.19
TCRBV3S1A0A5B6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TCRBV3S1A0A5B6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 MYCLP1-201ENST00000372451 1075 ntBASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 RPS2P55-201ENST00000397318 883 ntBASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV3S1A0A5B6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.23■□□□□ 0.19
TCRBV3S1A0A5B6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms