Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 AC010240.3-201ENST00000607688 395 ntBASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 FER1L4-210ENST00000615531 5998 ntBASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 LINC00554-201ENST00000564841 3011 ntBASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 CCR12P-201ENST00000446203 998 ntBASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 RNF216P1-203ENST00000404404 2427 ntBASIC15.96■□□□□ 0.15
PCDHGB1Q9Y5G3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGB1Q9Y5G3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGB1Q9Y5G3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGB1Q9Y5G3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGB1Q9Y5G3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGB1Q9Y5G3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.96■□□□□ 0.14
PCDHGB1Q9Y5G3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
PCDHGB1Q9Y5G3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 LYSMD4-203ENST00000378904 2122 ntBASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGB1Q9Y5G3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms