Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CBX8Q9HC52 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.43■□□□□ 0.7
CBX8Q9HC52 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX8Q9HC52 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CBX8Q9HC52 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CBX8Q9HC52 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CBX8Q9HC52 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CBX8Q9HC52 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CBX8Q9HC52 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX8Q9HC52 AC010460.3-201ENST00000511359 1579 ntBASIC19.42■□□□□ 0.7
CBX8Q9HC52 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.42■□□□□ 0.7
CBX8Q9HC52 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX8Q9HC52 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.42■□□□□ 0.7
CBX8Q9HC52 MTCL1P1-201ENST00000446207 792 ntBASIC19.42■□□□□ 0.7
CBX8Q9HC52 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.42■□□□□ 0.7
CBX8Q9HC52 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CBX8Q9HC52 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.42■□□□□ 0.7
CBX8Q9HC52 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.42■□□□□ 0.7
CBX8Q9HC52 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX8Q9HC52 AL136038.4-201ENST00000603606 1261 ntBASIC19.42■□□□□ 0.7
CBX8Q9HC52 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.42■□□□□ 0.7
CBX8Q9HC52 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.42■□□□□ 0.7
CBX8Q9HC52 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX8Q9HC52 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CBX8Q9HC52 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX8Q9HC52 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX8Q9HC52 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.42■□□□□ 0.7
CBX8Q9HC52 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX8Q9HC52 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX8Q9HC52 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
CBX8Q9HC52 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CBX8Q9HC52 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CBX8Q9HC52 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CBX8Q9HC52 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 AC007950.2-201ENST00000615045 2347 ntBASIC19.41■□□□□ 0.7
CBX8Q9HC52 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CBX8Q9HC52 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CBX8Q9HC52 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CBX8Q9HC52 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.41■□□□□ 0.7
CBX8Q9HC52 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.41■□□□□ 0.7
CBX8Q9HC52 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CBX8Q9HC52 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
CBX8Q9HC52 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CBX8Q9HC52 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.41■□□□□ 0.7
CBX8Q9HC52 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CBX8Q9HC52 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CBX8Q9HC52 AC132872.4-202ENST00000622924 2756 ntBASIC19.41■□□□□ 0.7
CBX8Q9HC52 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.41■□□□□ 0.7
CBX8Q9HC52 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CBX8Q9HC52 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX8Q9HC52 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.4■□□□□ 0.7
CBX8Q9HC52 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.4■□□□□ 0.7
CBX8Q9HC52 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CBX8Q9HC52 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.4■□□□□ 0.7
CBX8Q9HC52 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX8Q9HC52 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX8Q9HC52 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms