Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 KRT18P65-201ENST00000439811 1286 ntBASIC16.65■□□□□ 0.26
PIF1Q9H611 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.65■□□□□ 0.26
PIF1Q9H611 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.65■□□□□ 0.26
PIF1Q9H611 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.65■□□□□ 0.26
PIF1Q9H611 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PIF1Q9H611 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.65■□□□□ 0.26
PIF1Q9H611 AC133561.5-201ENST00000635547 218 ntBASIC16.65■□□□□ 0.26
PIF1Q9H611 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.65■□□□□ 0.26
PIF1Q9H611 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PIF1Q9H611 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PIF1Q9H611 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PIF1Q9H611 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PIF1Q9H611 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
PIF1Q9H611 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PIF1Q9H611 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
PIF1Q9H611 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.64■□□□□ 0.25
PIF1Q9H611 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.64■□□□□ 0.25
PIF1Q9H611 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.64■□□□□ 0.25
PIF1Q9H611 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
PIF1Q9H611 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.64■□□□□ 0.25
PIF1Q9H611 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.64■□□□□ 0.25
PIF1Q9H611 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.64■□□□□ 0.25
PIF1Q9H611 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.64■□□□□ 0.25
PIF1Q9H611 AC113404.2-201ENST00000507884 177 ntBASIC16.64■□□□□ 0.25
PIF1Q9H611 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.64■□□□□ 0.25
PIF1Q9H611 NEK4P2-201ENST00000580004 1012 ntBASIC16.64■□□□□ 0.25
PIF1Q9H611 AC024563.2-201ENST00000603282 481 ntBASIC16.64■□□□□ 0.25
PIF1Q9H611 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PIF1Q9H611 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PIF1Q9H611 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
PIF1Q9H611 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.64■□□□□ 0.25
PIF1Q9H611 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PIF1Q9H611 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.63■□□□□ 0.25
PIF1Q9H611 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PIF1Q9H611 LINC02199-201ENST00000506655 2702 ntBASIC16.63■□□□□ 0.25
PIF1Q9H611 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.63■□□□□ 0.25
PIF1Q9H611 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
PIF1Q9H611 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.63■□□□□ 0.25
PIF1Q9H611 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.63■□□□□ 0.25
PIF1Q9H611 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
PIF1Q9H611 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
PIF1Q9H611 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.63■□□□□ 0.25
PIF1Q9H611 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.63■□□□□ 0.25
PIF1Q9H611 SLC25A3P1-201ENST00000443844 931 ntBASIC16.63■□□□□ 0.25
PIF1Q9H611 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.63■□□□□ 0.25
PIF1Q9H611 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PIF1Q9H611 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.63■□□□□ 0.25
PIF1Q9H611 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.63■□□□□ 0.25
PIF1Q9H611 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.63■□□□□ 0.25
PIF1Q9H611 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
PIF1Q9H611 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.63■□□□□ 0.25
PIF1Q9H611 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
PIF1Q9H611 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
PIF1Q9H611 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PIF1Q9H611 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms