Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 MRPS18AP1-201ENST00000414458 589 ntBASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 AC107890.1-201ENST00000422478 521 ntBASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 BASP1P1-201ENST00000430708 665 ntBASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 AC125807.1-201ENST00000483097 614 ntBASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 TERF1P3-201ENST00000505638 1227 ntBASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 AC008761.3-201ENST00000624803 892 ntBASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-1Q9BYQ7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 HLA-DQB1-201ENST00000374943 1656 ntBASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 UXT-AS1-201ENST00000590504 1525 ntBASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 AKAP8P1-201ENST00000434743 1349 ntBASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 AC063926.2-201ENST00000623766 1308 ntBASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 AC007274.1-201ENST00000439805 662 ntBASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 RN7SL589P-201ENST00000481268 310 ntBASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 BAD-207ENST00000544785 525 ntTSL 3 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 AC140878.1-201ENST00000565277 250 ntBASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 AL009183.1-201ENST00000603760 355 ntBASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 AC084121.4-201ENST00000641598 221 ntBASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 AF228730.8-201ENST00000642140 221 ntBASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 TNXA-203ENST00000507684 2038 ntBASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC8.91□□□□□ -0.98
KRTAP4-1Q9BYQ7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms