Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MAPK10-262ENST00000641051 5738 ntBASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 AL671710.1-201ENST00000610245 2349 ntBASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 AC087633.2-202ENST00000565166 1439 ntBASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 AC104640.1-201ENST00000562617 2109 ntBASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 AC026691.1-201ENST00000602502 2017 ntBASIC9.55□□□□□ -0.88
SPTSSBQ8NFR3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 SF1-220ENST00000626028 704 ntTSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 CR383656.2-201ENST00000548656 2254 ntBASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC9.54□□□□□ -0.88
SPTSSBQ8NFR3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms