Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC011506.1-201ENST00000474329 610 ntBASIC13.03□□□□□ -0.32
NUP35Q8NFH5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP35Q8NFH5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
NUP35Q8NFH5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.02□□□□□ -0.32
NUP35Q8NFH5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP35Q8NFH5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
NUP35Q8NFH5 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.02□□□□□ -0.32
NUP35Q8NFH5 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.02□□□□□ -0.32
NUP35Q8NFH5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP35Q8NFH5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
NUP35Q8NFH5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.02□□□□□ -0.32
NUP35Q8NFH5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP35Q8NFH5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP35Q8NFH5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.02□□□□□ -0.32
NUP35Q8NFH5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.02□□□□□ -0.32
NUP35Q8NFH5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NUP35Q8NFH5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 TSPY6P-201ENST00000448518 926 ntBASIC13.02□□□□□ -0.33
NUP35Q8NFH5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 MIR4674-201ENST00000582457 87 ntBASIC13.02□□□□□ -0.33
NUP35Q8NFH5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 AL137784.2-201ENST00000607332 1000 ntBASIC13.02□□□□□ -0.33
NUP35Q8NFH5 AP000692.2-201ENST00000608391 879 ntBASIC13.02□□□□□ -0.33
NUP35Q8NFH5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
NUP35Q8NFH5 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NUP35Q8NFH5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP35Q8NFH5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP35Q8NFH5 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP35Q8NFH5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.01□□□□□ -0.33
NUP35Q8NFH5 AC104640.1-201ENST00000562617 2109 ntBASIC13.01□□□□□ -0.33
NUP35Q8NFH5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP35Q8NFH5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP35Q8NFH5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.01□□□□□ -0.33
NUP35Q8NFH5 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.01□□□□□ -0.33
NUP35Q8NFH5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NUP35Q8NFH5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NUP35Q8NFH5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NUP35Q8NFH5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms