Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS37AQ8NEZ2 AC116353.5-201ENST00000638148 1699 ntBASIC16.61■□□□□ 0.25
VPS37AQ8NEZ2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS37AQ8NEZ2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
VPS37AQ8NEZ2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.61■□□□□ 0.25
VPS37AQ8NEZ2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VPS37AQ8NEZ2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS37AQ8NEZ2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VPS37AQ8NEZ2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS37AQ8NEZ2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
VPS37AQ8NEZ2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.61■□□□□ 0.25
VPS37AQ8NEZ2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.61■□□□□ 0.25
VPS37AQ8NEZ2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS37AQ8NEZ2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.61■□□□□ 0.25
VPS37AQ8NEZ2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VPS37AQ8NEZ2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 KRT18P57-201ENST00000443599 1254 ntBASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 VENTXP5-201ENST00000523979 775 ntBASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 LINC01023-201ENST00000606054 436 ntBASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 HYMAI.1-201ENST00000620949 238 ntBASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 AC011676.5-201ENST00000624864 2660 ntBASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS37AQ8NEZ2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
VPS37AQ8NEZ2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.58■□□□□ 0.25
VPS37AQ8NEZ2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VPS37AQ8NEZ2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VPS37AQ8NEZ2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.58■□□□□ 0.25
VPS37AQ8NEZ2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VPS37AQ8NEZ2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS37AQ8NEZ2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS37AQ8NEZ2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS37AQ8NEZ2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VPS37AQ8NEZ2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
VPS37AQ8NEZ2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS37AQ8NEZ2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS37AQ8NEZ2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms