Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 AL135999.2-201ENST00000622438 1686 ntBASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 SIGLEC30P-201ENST00000455569 941 ntBASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 FOSL1P1-201ENST00000511041 816 ntBASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CDRT4Q8N9R6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
CDRT4Q8N9R6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
CDRT4Q8N9R6 AC106820.2-201ENST00000563775 3264 ntBASIC16.14■□□□□ 0.18
CDRT4Q8N9R6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 SPDYE21P-201ENST00000413323 827 ntBASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 AL121772.3-201ENST00000610840 674 ntBASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 LINC02012-201ENST00000608206 1725 ntBASIC16.14■□□□□ 0.17
CDRT4Q8N9R6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 SIGLEC16-201ENST00000599858 1437 ntBASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms