Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 NFIC-211ENST00000641145 8399 ntBASIC12.51□□□□□ -0.41
NFE4Q86UQ8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 AC112907.2-201ENST00000448639 330 ntBASIC12.51□□□□□ -0.41
NFE4Q86UQ8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 VENTXP5-201ENST00000523979 775 ntBASIC12.51□□□□□ -0.41
NFE4Q86UQ8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 LINC01311-201ENST00000565162 1445 ntBASIC12.51□□□□□ -0.41
NFE4Q86UQ8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
NFE4Q86UQ8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 AC105020.1-201ENST00000435356 2205 ntBASIC12.5□□□□□ -0.41
NFE4Q86UQ8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.5□□□□□ -0.41
NFE4Q86UQ8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 UPK3BP1-201ENST00000428678 509 ntBASIC12.5□□□□□ -0.41
NFE4Q86UQ8 KRT18P23-201ENST00000435622 1283 ntBASIC12.5□□□□□ -0.41
NFE4Q86UQ8 RASA4DP-201ENST00000460726 1199 ntBASIC12.5□□□□□ -0.41
NFE4Q86UQ8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 ZNF444P1-201ENST00000559497 298 ntBASIC12.5□□□□□ -0.41
NFE4Q86UQ8 AL136038.3-201ENST00000561909 1096 ntBASIC12.5□□□□□ -0.41
NFE4Q86UQ8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 MIR3180-4-201ENST00000582223 153 ntBASIC12.5□□□□□ -0.41
NFE4Q86UQ8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 AC024243.1-201ENST00000609234 778 ntBASIC12.5□□□□□ -0.41
NFE4Q86UQ8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 IER3-202ENST00000376377 1350 ntBASIC12.5□□□□□ -0.41
NFE4Q86UQ8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 HOXB1-202ENST00000577092 1414 ntBASIC12.5□□□□□ -0.41
NFE4Q86UQ8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 AC034236.2-201ENST00000606662 1610 ntBASIC12.5□□□□□ -0.41
NFE4Q86UQ8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
NFE4Q86UQ8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NFE4Q86UQ8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms