Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.62□□□□□ -0.23
RAB5BP61020 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RAB5BP61020 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RAB5BP61020 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RAB5BP61020 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB5BP61020 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB5BP61020 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RAB5BP61020 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB5BP61020 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB5BP61020 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RAB5BP61020 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RAB5BP61020 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 RPP21-222ENST00000433076 577 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB5BP61020 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC13.61□□□□□ -0.23
RAB5BP61020 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.61□□□□□ -0.23
RAB5BP61020 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.61□□□□□ -0.23
RAB5BP61020 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB5BP61020 MFSD11-216ENST00000590393 1141 ntBASIC13.61□□□□□ -0.23
RAB5BP61020 AC068587.9-201ENST00000641814 219 ntBASIC13.61□□□□□ -0.23
RAB5BP61020 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB5BP61020 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 MYLKP1-201ENST00000509077 1580 ntBASIC13.61□□□□□ -0.23
RAB5BP61020 RCC2P6-201ENST00000526625 1557 ntBASIC13.61□□□□□ -0.23
RAB5BP61020 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB5BP61020 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
RAB5BP61020 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RAB5BP61020 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB5BP61020 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
RAB5BP61020 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.61□□□□□ -0.23
RAB5BP61020 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB5BP61020 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB5BP61020 AL731571.1-201ENST00000617058 5428 ntBASIC13.61□□□□□ -0.23
RAB5BP61020 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RAB5BP61020 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RAB5BP61020 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RAB5BP61020 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB5BP61020 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.6□□□□□ -0.23
RAB5BP61020 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 AL359183.1-201ENST00000623796 2132 ntBASIC13.6□□□□□ -0.23
RAB5BP61020 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RAB5BP61020 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RAB5BP61020 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB5BP61020 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB5BP61020 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RAB5BP61020 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RAB5BP61020 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB5BP61020 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB5BP61020 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB5BP61020 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB5BP61020 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 AC012414.1-201ENST00000556676 535 ntBASIC13.6□□□□□ -0.23
RAB5BP61020 MIR4466-201ENST00000606121 54 ntBASIC13.6□□□□□ -0.23
RAB5BP61020 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB5BP61020 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB5BP61020 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
RAB5BP61020 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB5BP61020 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.59□□□□□ -0.23
RAB5BP61020 AC116353.5-201ENST00000638148 1699 ntBASIC13.59□□□□□ -0.23
RAB5BP61020 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB5BP61020 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.59□□□□□ -0.23
RAB5BP61020 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB5BP61020 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms