Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH13P55290 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDH13P55290 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDH13P55290 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 RCN1P1-201ENST00000400413 996 ntBASIC17.02■□□□□ 0.32
CDH13P55290 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.02■□□□□ 0.32
CDH13P55290 AL592071.1-201ENST00000611956 408 ntBASIC17.02■□□□□ 0.32
CDH13P55290 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDH13P55290 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH13P55290 AC079328.2-201ENST00000561241 3354 ntBASIC17.02■□□□□ 0.32
CDH13P55290 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH13P55290 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDH13P55290 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CDH13P55290 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDH13P55290 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH13P55290 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH13P55290 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CDH13P55290 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CDH13P55290 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH13P55290 TNRC18P3-201ENST00000441896 2691 ntBASIC17.02■□□□□ 0.31
CDH13P55290 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.02■□□□□ 0.31
CDH13P55290 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.02■□□□□ 0.31
CDH13P55290 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDH13P55290 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 LINC02012-201ENST00000608206 1725 ntBASIC17.01■□□□□ 0.31
CDH13P55290 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CDH13P55290 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH13P55290 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
CDH13P55290 AL845331.1-201ENST00000424978 1190 ntBASIC17.01■□□□□ 0.31
CDH13P55290 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH13P55290 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDH13P55290 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 AC125634.1-201ENST00000438758 1403 ntBASIC17.01■□□□□ 0.31
CDH13P55290 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH13P55290 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDH13P55290 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 CROCCP1-201ENST00000426910 5675 ntBASIC17.01■□□□□ 0.31
CDH13P55290 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH13P55290 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH13P55290 FLJ38576-201ENST00000623820 2459 ntBASIC17.01■□□□□ 0.31
CDH13P55290 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CDH13P55290 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17■□□□□ 0.31
CDH13P55290 AC105020.1-201ENST00000435356 2205 ntBASIC17■□□□□ 0.31
CDH13P55290 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
CDH13P55290 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17■□□□□ 0.31
CDH13P55290 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDH13P55290 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH13P55290 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17■□□□□ 0.31
CDH13P55290 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17■□□□□ 0.31
CDH13P55290 IGHV3-52-201ENST00000519770 353 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms