Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CLTCL1P53675 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CLTCL1P53675 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CLTCL1P53675 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CLTCL1P53675 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
CLTCL1P53675 LHX6-205ENST00000464484 666 ntTSL 2 BASIC24.58■■□□□ 1.53
CLTCL1P53675 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
CLTCL1P53675 VPS29-207ENST00000549970 818 ntTSL 3 BASIC24.58■■□□□ 1.53
CLTCL1P53675 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CLTCL1P53675 AC004449.1-201ENST00000564240 433 ntBASIC24.58■■□□□ 1.53
CLTCL1P53675 MIR3909-201ENST00000579518 119 ntBASIC24.58■■□□□ 1.53
CLTCL1P53675 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC24.58■■□□□ 1.53
CLTCL1P53675 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC24.58■■□□□ 1.53
CLTCL1P53675 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC24.58■■□□□ 1.53
CLTCL1P53675 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC24.58■■□□□ 1.53
CLTCL1P53675 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CLTCL1P53675 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CLTCL1P53675 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CLTCL1P53675 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
CLTCL1P53675 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC24.58■■□□□ 1.53
CLTCL1P53675 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CLTCL1P53675 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC24.58■■□□□ 1.52
CLTCL1P53675 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLTCL1P53675 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
CLTCL1P53675 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLTCL1P53675 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC24.57■■□□□ 1.52
CLTCL1P53675 SPCS2P4-201ENST00000436160 681 ntBASIC24.57■■□□□ 1.52
CLTCL1P53675 SPDYE14P-201ENST00000442619 822 ntBASIC24.57■■□□□ 1.52
CLTCL1P53675 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLTCL1P53675 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
CLTCL1P53675 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CLTCL1P53675 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLTCL1P53675 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLTCL1P53675 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLTCL1P53675 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC24.57■■□□□ 1.52
CLTCL1P53675 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
CLTCL1P53675 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC24.57■■□□□ 1.52
CLTCL1P53675 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLTCL1P53675 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLTCL1P53675 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CLTCL1P53675 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CLTCL1P53675 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC24.57■■□□□ 1.52
CLTCL1P53675 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC24.57■■□□□ 1.52
CLTCL1P53675 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC24.57■■□□□ 1.52
CLTCL1P53675 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CLTCL1P53675 AC109635.5-201ENST00000533593 962 ntBASIC24.57■■□□□ 1.52
CLTCL1P53675 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CLTCL1P53675 TSFM-210ENST00000550559 897 ntTSL 5 BASIC24.57■■□□□ 1.52
CLTCL1P53675 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC24.57■■□□□ 1.52
CLTCL1P53675 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CLTCL1P53675 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CLTCL1P53675 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLTCL1P53675 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CLTCL1P53675 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
CLTCL1P53675 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLTCL1P53675 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLTCL1P53675 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC24.56■■□□□ 1.52
CLTCL1P53675 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC24.56■■□□□ 1.52
CLTCL1P53675 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
CLTCL1P53675 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CLTCL1P53675 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLTCL1P53675 AL353732.1-201ENST00000569618 1459 ntBASIC24.56■■□□□ 1.52
CLTCL1P53675 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLTCL1P53675 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC24.56■■□□□ 1.52
CLTCL1P53675 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLTCL1P53675 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CLTCL1P53675 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CLTCL1P53675 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
CLTCL1P53675 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CLTCL1P53675 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CLTCL1P53675 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CLTCL1P53675 AL592309.1-201ENST00000443127 649 ntBASIC24.55■■□□□ 1.52
CLTCL1P53675 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CLTCL1P53675 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC24.55■■□□□ 1.52
CLTCL1P53675 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC24.55■■□□□ 1.52
CLTCL1P53675 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CLTCL1P53675 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CLTCL1P53675 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CLTCL1P53675 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CLTCL1P53675 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
CLTCL1P53675 KLK8-202ENST00000320838 456 ntTSL 5 BASIC24.54■■□□□ 1.52
CLTCL1P53675 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC24.54■■□□□ 1.52
CLTCL1P53675 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC24.54■■□□□ 1.52
CLTCL1P53675 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC24.54■■□□□ 1.52
CLTCL1P53675 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC24.54■■□□□ 1.52
CLTCL1P53675 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC24.54■■□□□ 1.52
CLTCL1P53675 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC24.54■■□□□ 1.52
CLTCL1P53675 FAM86C2P-203ENST00000528684 1004 ntBASIC24.54■■□□□ 1.52
CLTCL1P53675 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CLTCL1P53675 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC24.54■■□□□ 1.52
CLTCL1P53675 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC24.54■■□□□ 1.52
CLTCL1P53675 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CLTCL1P53675 AC116353.5-201ENST00000638148 1699 ntBASIC24.54■■□□□ 1.52
CLTCL1P53675 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC24.54■■□□□ 1.52
CLTCL1P53675 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC24.54■■□□□ 1.52
CLTCL1P53675 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CLTCL1P53675 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CLTCL1P53675 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
CLTCL1P53675 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CLTCL1P53675 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms