Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
LIMK2P53671 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LIMK2P53671 AP005901.3-202ENST00000581653 237 ntBASIC17.54■□□□□ 0.4
LIMK2P53671 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.54■□□□□ 0.4
LIMK2P53671 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.54■□□□□ 0.4
LIMK2P53671 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIMK2P53671 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIMK2P53671 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LIMK2P53671 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LIMK2P53671 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LIMK2P53671 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.54■□□□□ 0.4
LIMK2P53671 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIMK2P53671 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.54■□□□□ 0.4
LIMK2P53671 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIMK2P53671 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.54■□□□□ 0.4
LIMK2P53671 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.54■□□□□ 0.4
LIMK2P53671 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.53■□□□□ 0.4
LIMK2P53671 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LIMK2P53671 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.53■□□□□ 0.4
LIMK2P53671 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIMK2P53671 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.53■□□□□ 0.4
LIMK2P53671 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIMK2P53671 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.53■□□□□ 0.4
LIMK2P53671 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIMK2P53671 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
LIMK2P53671 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIMK2P53671 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.53■□□□□ 0.4
LIMK2P53671 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIMK2P53671 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
LIMK2P53671 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
LIMK2P53671 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIMK2P53671 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
LIMK2P53671 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIMK2P53671 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.53■□□□□ 0.4
LIMK2P53671 AC079781.3-201ENST00000449110 356 ntBASIC17.53■□□□□ 0.4
LIMK2P53671 KRT16P4-201ENST00000453883 522 ntBASIC17.53■□□□□ 0.4
LIMK2P53671 AC009078.2-202ENST00000463353 338 ntBASIC17.53■□□□□ 0.4
LIMK2P53671 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.53■□□□□ 0.4
LIMK2P53671 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIMK2P53671 AL353801.3-201ENST00000609898 542 ntBASIC17.53■□□□□ 0.4
LIMK2P53671 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.53■□□□□ 0.4
LIMK2P53671 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LIMK2P53671 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIMK2P53671 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIMK2P53671 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIMK2P53671 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIMK2P53671 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LIMK2P53671 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIMK2P53671 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIMK2P53671 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.53■□□□□ 0.4
LIMK2P53671 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIMK2P53671 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIMK2P53671 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIMK2P53671 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIMK2P53671 AC097374.2-201ENST00000618617 1306 ntBASIC17.52■□□□□ 0.4
LIMK2P53671 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIMK2P53671 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.52■□□□□ 0.4
LIMK2P53671 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LIMK2P53671 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIMK2P53671 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.52■□□□□ 0.4
LIMK2P53671 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LIMK2P53671 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIMK2P53671 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIMK2P53671 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.52■□□□□ 0.4
LIMK2P53671 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LIMK2P53671 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LIMK2P53671 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.52■□□□□ 0.4
LIMK2P53671 AC091607.1-201ENST00000490318 1060 ntBASIC17.52■□□□□ 0.4
LIMK2P53671 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.52■□□□□ 0.4
LIMK2P53671 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LIMK2P53671 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIMK2P53671 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LIMK2P53671 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.52■□□□□ 0.4
LIMK2P53671 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.52■□□□□ 0.4
LIMK2P53671 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LIMK2P53671 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.52■□□□□ 0.4
LIMK2P53671 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIMK2P53671 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.52■□□□□ 0.4
LIMK2P53671 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIMK2P53671 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LIMK2P53671 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
LIMK2P53671 AC060834.1-201ENST00000443027 2032 ntBASIC17.52■□□□□ 0.39
LIMK2P53671 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.52■□□□□ 0.39
LIMK2P53671 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LIMK2P53671 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LIMK2P53671 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LIMK2P53671 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK2P53671 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK2P53671 AC124067.4-201ENST00000519691 2379 ntBASIC17.51■□□□□ 0.39
LIMK2P53671 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK2P53671 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK2P53671 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK2P53671 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LIMK2P53671 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK2P53671 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
LIMK2P53671 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.51■□□□□ 0.39
LIMK2P53671 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.51■□□□□ 0.39
LIMK2P53671 MINOS1P3-201ENST00000457048 203 ntBASIC17.51■□□□□ 0.39
LIMK2P53671 AC010460.3-201ENST00000511359 1579 ntBASIC17.51■□□□□ 0.39
LIMK2P53671 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms