Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CNGA1P29973 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CNGA1P29973 AL805961.1-202ENST00000641562 540 ntBASIC19.75■□□□□ 0.75
CNGA1P29973 AP000997.3-201ENST00000623333 2250 ntBASIC19.75■□□□□ 0.75
CNGA1P29973 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CNGA1P29973 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CNGA1P29973 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CNGA1P29973 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.75■□□□□ 0.75
CNGA1P29973 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.75■□□□□ 0.75
CNGA1P29973 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 AC138028.4-201ENST00000564984 1845 ntBASIC19.74■□□□□ 0.75
CNGA1P29973 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.74■□□□□ 0.75
CNGA1P29973 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CNGA1P29973 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.74■□□□□ 0.75
CNGA1P29973 AL035633.1-201ENST00000406139 838 ntBASIC19.74■□□□□ 0.75
CNGA1P29973 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.74■□□□□ 0.75
CNGA1P29973 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.74■□□□□ 0.75
CNGA1P29973 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.74■□□□□ 0.75
CNGA1P29973 STK19B-204ENST00000512515 211 ntBASIC19.74■□□□□ 0.75
CNGA1P29973 AP000344.2-201ENST00000512987 629 ntBASIC19.74■□□□□ 0.75
CNGA1P29973 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.74■□□□□ 0.75
CNGA1P29973 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.74■□□□□ 0.75
CNGA1P29973 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.74■□□□□ 0.75
CNGA1P29973 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CNGA1P29973 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CNGA1P29973 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.74■□□□□ 0.75
CNGA1P29973 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNGA1P29973 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNGA1P29973 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNGA1P29973 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.73■□□□□ 0.75
CNGA1P29973 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNGA1P29973 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNGA1P29973 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNGA1P29973 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNGA1P29973 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNGA1P29973 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNGA1P29973 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CNGA1P29973 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNGA1P29973 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.73■□□□□ 0.75
CNGA1P29973 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CNGA1P29973 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.73■□□□□ 0.75
CNGA1P29973 SPCS2P1-201ENST00000561636 679 ntBASIC19.73■□□□□ 0.75
CNGA1P29973 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.73■□□□□ 0.75
CNGA1P29973 GGTLC5P-201ENST00000617623 998 ntBASIC19.73■□□□□ 0.75
CNGA1P29973 AC093512.1-201ENST00000617969 520 ntBASIC19.73■□□□□ 0.75
CNGA1P29973 AC007064.4-201ENST00000637740 555 ntBASIC19.73■□□□□ 0.75
CNGA1P29973 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CNGA1P29973 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.73■□□□□ 0.75
CNGA1P29973 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNGA1P29973 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNGA1P29973 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNGA1P29973 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CNGA1P29973 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNGA1P29973 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.73■□□□□ 0.75
CNGA1P29973 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNGA1P29973 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.73■□□□□ 0.75
CNGA1P29973 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNGA1P29973 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNGA1P29973 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.72■□□□□ 0.75
CNGA1P29973 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CNGA1P29973 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CNGA1P29973 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNGA1P29973 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNGA1P29973 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNGA1P29973 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNGA1P29973 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CNGA1P29973 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNGA1P29973 AL139400.1-201ENST00000366220 510 ntBASIC19.72■□□□□ 0.75
CNGA1P29973 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNGA1P29973 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.72■□□□□ 0.75
CNGA1P29973 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNGA1P29973 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNGA1P29973 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.72■□□□□ 0.75
CNGA1P29973 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CNGA1P29973 ACTG1P14-201ENST00000446382 1122 ntBASIC19.72■□□□□ 0.75
CNGA1P29973 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.72■□□□□ 0.75
CNGA1P29973 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNGA1P29973 AC091812.2-201ENST00000619081 385 ntBASIC19.72■□□□□ 0.75
CNGA1P29973 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms