Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN3P26045 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN3P26045 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PTPN3P26045 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN3P26045 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PTPN3P26045 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN3P26045 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN3P26045 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.73■□□□□ 0.43
PTPN3P26045 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.73■□□□□ 0.43
PTPN3P26045 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN3P26045 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PTPN3P26045 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.73■□□□□ 0.43
PTPN3P26045 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.73■□□□□ 0.43
PTPN3P26045 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PTPN3P26045 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PTPN3P26045 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPN3P26045 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN3P26045 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.73■□□□□ 0.43
PTPN3P26045 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN3P26045 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN3P26045 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN3P26045 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN3P26045 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN3P26045 PCDHA12-202ENST00000613593 2588 ntBASIC17.73■□□□□ 0.43
PTPN3P26045 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.73■□□□□ 0.43
PTPN3P26045 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PTPN3P26045 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN3P26045 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTPN3P26045 LINC02012-201ENST00000608206 1725 ntBASIC17.72■□□□□ 0.43
PTPN3P26045 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PTPN3P26045 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PTPN3P26045 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
PTPN3P26045 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN3P26045 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN3P26045 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN3P26045 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
PTPN3P26045 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.72■□□□□ 0.43
PTPN3P26045 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN3P26045 ABCD1P5-201ENST00000445663 754 ntBASIC17.72■□□□□ 0.43
PTPN3P26045 FOSL1P1-201ENST00000511041 816 ntBASIC17.72■□□□□ 0.43
PTPN3P26045 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.72■□□□□ 0.43
PTPN3P26045 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.72■□□□□ 0.43
PTPN3P26045 AL591684.3-201ENST00000605187 298 ntBASIC17.72■□□□□ 0.43
PTPN3P26045 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.72■□□□□ 0.43
PTPN3P26045 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN3P26045 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
PTPN3P26045 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PTPN3P26045 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
PTPN3P26045 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.72■□□□□ 0.43
PTPN3P26045 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN3P26045 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PTPN3P26045 AC148477.5-201ENST00000625164 1645 ntBASIC17.72■□□□□ 0.43
PTPN3P26045 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PTPN3P26045 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.72■□□□□ 0.43
PTPN3P26045 PKD1P1-201ENST00000458669 6805 ntBASIC17.72■□□□□ 0.43
PTPN3P26045 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTPN3P26045 PRORSD1P-202ENST00000563365 2154 ntBASIC17.72■□□□□ 0.43
PTPN3P26045 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN3P26045 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN3P26045 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN3P26045 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPN3P26045 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN3P26045 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN3P26045 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN3P26045 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN3P26045 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN3P26045 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN3P26045 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPN3P26045 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN3P26045 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN3P26045 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN3P26045 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPN3P26045 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPN3P26045 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.71■□□□□ 0.43
PTPN3P26045 KRT16P4-201ENST00000453883 522 ntBASIC17.71■□□□□ 0.43
PTPN3P26045 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.71■□□□□ 0.43
PTPN3P26045 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms