Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.8□□□□□ -0.2
IFNA1P01562 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.8□□□□□ -0.2
IFNA1P01562 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.8□□□□□ -0.2
IFNA1P01562 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.8□□□□□ -0.2
IFNA1P01562 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
IFNA1P01562 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.8□□□□□ -0.2
IFNA1P01562 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 AC004951.3-201ENST00000418645 1148 ntBASIC13.8□□□□□ -0.2
IFNA1P01562 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 AC006015.1-201ENST00000429970 570 ntBASIC13.8□□□□□ -0.2
IFNA1P01562 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
IFNA1P01562 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.8□□□□□ -0.2
IFNA1P01562 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.8□□□□□ -0.2
IFNA1P01562 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.8□□□□□ -0.2
IFNA1P01562 AC091874.3-201ENST00000512672 1195 ntBASIC13.8□□□□□ -0.2
IFNA1P01562 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.8□□□□□ -0.2
IFNA1P01562 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.8□□□□□ -0.2
IFNA1P01562 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.8□□□□□ -0.2
IFNA1P01562 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.8□□□□□ -0.2
IFNA1P01562 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC13.8□□□□□ -0.2
IFNA1P01562 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.8□□□□□ -0.2
IFNA1P01562 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.8□□□□□ -0.2
IFNA1P01562 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.8□□□□□ -0.2
IFNA1P01562 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
IFNA1P01562 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.8□□□□□ -0.2
IFNA1P01562 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.8□□□□□ -0.2
IFNA1P01562 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
IFNA1P01562 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.8□□□□□ -0.2
IFNA1P01562 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.8□□□□□ -0.2
IFNA1P01562 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.8□□□□□ -0.2
IFNA1P01562 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
IFNA1P01562 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IFNA1P01562 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
IFNA1P01562 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.79□□□□□ -0.2
IFNA1P01562 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.79□□□□□ -0.2
IFNA1P01562 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
IFNA1P01562 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 AC079328.2-201ENST00000561241 3354 ntBASIC13.79□□□□□ -0.2
IFNA1P01562 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
IFNA1P01562 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.79□□□□□ -0.2
IFNA1P01562 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.79□□□□□ -0.2
IFNA1P01562 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.79□□□□□ -0.2
IFNA1P01562 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.79□□□□□ -0.2
IFNA1P01562 POM121L13P-201ENST00000422362 380 ntBASIC13.79□□□□□ -0.2
IFNA1P01562 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.79□□□□□ -0.2
IFNA1P01562 AC091390.4-202ENST00000476426 537 ntBASIC13.79□□□□□ -0.2
IFNA1P01562 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.79□□□□□ -0.2
IFNA1P01562 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
IFNA1P01562 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.79□□□□□ -0.2
IFNA1P01562 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.79□□□□□ -0.2
IFNA1P01562 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.79□□□□□ -0.2
IFNA1P01562 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
IFNA1P01562 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.79□□□□□ -0.2
IFNA1P01562 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
IFNA1P01562 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
IFNA1P01562 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
IFNA1P01562 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
IFNA1P01562 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
IFNA1P01562 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms