Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALDH1A1P00352 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALDH1A1P00352 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALDH1A1P00352 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALDH1A1P00352 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALDH1A1P00352 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALDH1A1P00352 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 AC027307.2-201ENST00000591252 911 ntBASIC19.65■□□□□ 0.74
ALDH1A1P00352 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALDH1A1P00352 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALDH1A1P00352 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALDH1A1P00352 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALDH1A1P00352 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALDH1A1P00352 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALDH1A1P00352 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALDH1A1P00352 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALDH1A1P00352 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
ALDH1A1P00352 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
ALDH1A1P00352 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ALDH1A1P00352 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.64■□□□□ 0.74
ALDH1A1P00352 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ALDH1A1P00352 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALDH1A1P00352 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.64■□□□□ 0.73
ALDH1A1P00352 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALDH1A1P00352 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALDH1A1P00352 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALDH1A1P00352 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALDH1A1P00352 AC098614.1-201ENST00000368528 745 ntBASIC19.64■□□□□ 0.73
ALDH1A1P00352 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALDH1A1P00352 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALDH1A1P00352 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.64■□□□□ 0.73
ALDH1A1P00352 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.64■□□□□ 0.73
ALDH1A1P00352 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALDH1A1P00352 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALDH1A1P00352 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALDH1A1P00352 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
ALDH1A1P00352 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.64■□□□□ 0.73
ALDH1A1P00352 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.64■□□□□ 0.73
ALDH1A1P00352 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.64■□□□□ 0.73
ALDH1A1P00352 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.64■□□□□ 0.73
ALDH1A1P00352 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.64■□□□□ 0.73
ALDH1A1P00352 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.64■□□□□ 0.73
ALDH1A1P00352 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALDH1A1P00352 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALDH1A1P00352 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALDH1A1P00352 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALDH1A1P00352 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALDH1A1P00352 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALDH1A1P00352 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALDH1A1P00352 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALDH1A1P00352 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ALDH1A1P00352 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALDH1A1P00352 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALDH1A1P00352 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALDH1A1P00352 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ALDH1A1P00352 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.63■□□□□ 0.73
ALDH1A1P00352 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ALDH1A1P00352 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALDH1A1P00352 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALDH1A1P00352 AL031598.1-201ENST00000561511 1773 ntBASIC19.62■□□□□ 0.73
ALDH1A1P00352 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALDH1A1P00352 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALDH1A1P00352 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.62■□□□□ 0.73
ALDH1A1P00352 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ALDH1A1P00352 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALDH1A1P00352 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms