Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CCDC188H7C350 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CCDC188H7C350 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC188H7C350 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC188H7C350 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CCDC188H7C350 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC188H7C350 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC188H7C350 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC188H7C350 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC188H7C350 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC188H7C350 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC188H7C350 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC188H7C350 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 IGHV3-52-201ENST00000519770 353 ntBASIC18.09■□□□□ 0.49
CCDC188H7C350 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC188H7C350 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC188H7C350 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC188H7C350 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC188H7C350 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC188H7C350 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CCDC188H7C350 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC188H7C350 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC188H7C350 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC188H7C350 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC188H7C350 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC188H7C350 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC188H7C350 AC010460.3-201ENST00000511359 1579 ntBASIC18.08■□□□□ 0.49
CCDC188H7C350 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC188H7C350 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC188H7C350 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC188H7C350 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC188H7C350 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CCDC188H7C350 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.08■□□□□ 0.49
CCDC188H7C350 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC188H7C350 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC188H7C350 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC188H7C350 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC188H7C350 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CCDC188H7C350 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC188H7C350 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC188H7C350 AL353692.3-201ENST00000407031 1396 ntBASIC18.08■□□□□ 0.49
CCDC188H7C350 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC188H7C350 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC188H7C350 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC188H7C350 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC188H7C350 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CCDC188H7C350 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC188H7C350 MMP23A-201ENST00000234610 1017 ntBASIC18.08■□□□□ 0.48
CCDC188H7C350 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC188H7C350 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC188H7C350 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC188H7C350 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC188H7C350 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC188H7C350 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC188H7C350 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC188H7C350 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC188H7C350 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC188H7C350 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC188H7C350 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC188H7C350 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC188H7C350 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC188H7C350 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCDC188H7C350 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC188H7C350 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC188H7C350 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CCDC188H7C350 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC188H7C350 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC188H7C350 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC188H7C350 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC188H7C350 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCDC188H7C350 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC188H7C350 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC188H7C350 EGFEM1P-202ENST00000431685 1563 ntBASIC18.08■□□□□ 0.48
CCDC188H7C350 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC188H7C350 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
CCDC188H7C350 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC188H7C350 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CCDC188H7C350 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms