Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.66■□□□□ 0.74
LOC285556D6RIA3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LOC285556D6RIA3 AC092474.2-201ENST00000424288 719 ntBASIC19.66■□□□□ 0.74
LOC285556D6RIA3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.66■□□□□ 0.74
LOC285556D6RIA3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.66■□□□□ 0.74
LOC285556D6RIA3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LOC285556D6RIA3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LOC285556D6RIA3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.66■□□□□ 0.74
LOC285556D6RIA3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LOC285556D6RIA3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LOC285556D6RIA3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LOC285556D6RIA3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LOC285556D6RIA3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LOC285556D6RIA3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LOC285556D6RIA3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LOC285556D6RIA3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LOC285556D6RIA3 GNAS-203ENST00000306120 1878 ntBASIC19.66■□□□□ 0.74
LOC285556D6RIA3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 AC104581.1-202ENST00000635932 2618 ntBASIC19.65■□□□□ 0.74
LOC285556D6RIA3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 FAM207CP-201ENST00000443486 507 ntBASIC19.65■□□□□ 0.74
LOC285556D6RIA3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 AC012569.1-201ENST00000591191 1524 ntBASIC19.65■□□□□ 0.74
LOC285556D6RIA3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 AC004408.2-201ENST00000623613 2777 ntBASIC19.65■□□□□ 0.74
LOC285556D6RIA3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 AC069120.2-201ENST00000524091 540 ntBASIC19.65■□□□□ 0.74
LOC285556D6RIA3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 AC026150.2-201ENST00000564693 1156 ntBASIC19.65■□□□□ 0.74
LOC285556D6RIA3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
LOC285556D6RIA3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.64■□□□□ 0.74
LOC285556D6RIA3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LOC285556D6RIA3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.64■□□□□ 0.74
LOC285556D6RIA3 AC008677.1-201ENST00000519230 1561 ntBASIC19.64■□□□□ 0.74
LOC285556D6RIA3 FO538757.1-201ENST00000623083 1397 ntBASIC19.64■□□□□ 0.73
LOC285556D6RIA3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.64■□□□□ 0.73
LOC285556D6RIA3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LOC285556D6RIA3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
LOC285556D6RIA3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LOC285556D6RIA3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.64■□□□□ 0.73
LOC285556D6RIA3 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.64■□□□□ 0.73
LOC285556D6RIA3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LOC285556D6RIA3 SLC25A39P2-201ENST00000537614 270 ntBASIC19.64■□□□□ 0.73
LOC285556D6RIA3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.64■□□□□ 0.73
LOC285556D6RIA3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
LOC285556D6RIA3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
LOC285556D6RIA3 EGFEM1P-202ENST00000431685 1563 ntBASIC19.64■□□□□ 0.73
LOC285556D6RIA3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LOC285556D6RIA3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.63■□□□□ 0.73
LOC285556D6RIA3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LOC285556D6RIA3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.62■□□□□ 0.73
LOC285556D6RIA3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.62■□□□□ 0.73
LOC285556D6RIA3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.62■□□□□ 0.73
LOC285556D6RIA3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms