Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PLEKHD1A6NEE1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC26.5■■□□□ 1.83
PLEKHD1A6NEE1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PLEKHD1A6NEE1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC26.5■■□□□ 1.83
PLEKHD1A6NEE1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC26.5■■□□□ 1.83
PLEKHD1A6NEE1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC26.5■■□□□ 1.83
PLEKHD1A6NEE1 AC097493.3-201ENST00000509725 367 ntBASIC26.5■■□□□ 1.83
PLEKHD1A6NEE1 IGHV3-42-201ENST00000520410 361 ntBASIC26.5■■□□□ 1.83
PLEKHD1A6NEE1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC26.5■■□□□ 1.83
PLEKHD1A6NEE1 LINC01451-201ENST00000623792 534 ntBASIC26.5■■□□□ 1.83
PLEKHD1A6NEE1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PLEKHD1A6NEE1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC26.5■■□□□ 1.83
PLEKHD1A6NEE1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PLEKHD1A6NEE1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC26.5■■□□□ 1.83
PLEKHD1A6NEE1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
PLEKHD1A6NEE1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 EDF1-203ENST00000371649 790 ntTSL 2 BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PLEKHD1A6NEE1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC26.48■■□□□ 1.83
PLEKHD1A6NEE1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
PLEKHD1A6NEE1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PLEKHD1A6NEE1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PLEKHD1A6NEE1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PLEKHD1A6NEE1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
PLEKHD1A6NEE1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
PLEKHD1A6NEE1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC26.48■■□□□ 1.83
PLEKHD1A6NEE1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PLEKHD1A6NEE1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PLEKHD1A6NEE1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PLEKHD1A6NEE1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC26.48■■□□□ 1.83
PLEKHD1A6NEE1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PLEKHD1A6NEE1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC26.48■■□□□ 1.83
PLEKHD1A6NEE1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 AC069120.2-201ENST00000524091 540 ntBASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
PLEKHD1A6NEE1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 PPP6R2P1-201ENST00000450880 1275 ntBASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 AL512638.1-201ENST00000457493 794 ntBASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
PLEKHD1A6NEE1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC26.45■■□□□ 1.83
PLEKHD1A6NEE1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
PLEKHD1A6NEE1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms